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NECEvent2014_1_5_scaffold_19_149

Organism: NECEvent2014_1_5_Escherichia_coli_50_33_partial

partial RP 25 / 55 MC: 5 BSCG 25 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(165169..165744)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoE n=10 Tax=Klebsiella RepID=G8WG64_KLEOK similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 375
  • Evalue 3.60e-101
  • rbh
RNA polymerase sigma factor RpoE similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 375
  • Evalue 1.00e-101
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:EKP29437.1}; TaxID=290336 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 375
  • Evalue 5.10e-101

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Taxonomy

Klebsiella oxytoca → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGCGAGCAGTTAACGGATCAGGTCCTCGTTGAACGGGTCCAGAAAGGAGATCAGAAAGCATTTAACCTGCTGGTGGTGCGCTATCAGCATAAGGTTGCAAGTCTGGTCTCCCGCTACGTGCCGCCGGGCGATATCGCTGACGTTGTTCAGGAATCGTTCGTTAAAGCATGGCGTGCGCTGGATTCTTTCCGGGGGGATAGCGCTTTTTACACCTGGTTATATCGCATCGCCGTAAACACGGCGAAGAATTATCTGGTTGCTCAGGGACGCCGTCCGCCATCCAGCGATGTTGATGCGAATGATGCTGAAAACTTCGAAAGTGGCGGGGCATTGAAAGAAATTTCGAACCCTGAGAACTTAATGTTGTCAGAAGAGCTGAGACAAATAGTTTTTCGTACCATTGAATCGCTTCCGGAAGATTTACGCATGGCAATTACCTTGCGGGAGCTGGATGGCATGAGCTATGAAGAAATAGCCGCCATCATGGATTGTCCGGTGGGCACAGTGCGTTCGCGCATCTTCCGGGCGCGAGAAGCTATTGATAATAAAGTTCAACCGCTAATCAGGCGTTGA
PROTEIN sequence
Length: 192
MSEQLTDQVLVERVQKGDQKAFNLLVVRYQHKVASLVSRYVPPGDIADVVQESFVKAWRALDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDANDAENFESGGALKEISNPENLMLSEELRQIVFRTIESLPEDLRMAITLRELDGMSYEEIAAIMDCPVGTVRSRIFRAREAIDNKVQPLIRR*