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NECEvent2014_1_5_scaffold_29_80

Organism: NECEvent2014_1_5_Escherichia_coli_50_33_partial

partial RP 25 / 55 MC: 5 BSCG 25 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(91870..93072)

Top 3 Functional Annotations

Value Algorithm Source
Protein transport protein hofC n=29 Tax=Escherichia coli RepID=E2QF32_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 400.0
  • Bit_score: 792
  • Evalue 2.00e-226
  • rbh
hofC; Protein transport protein hofC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 400.0
  • Bit_score: 792
  • Evalue 5.60e-227
  • rbh
Bacterial type II secretion system protein F domain protein {ECO:0000313|EMBL:ESD45201.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 400.0
  • Bit_score: 792
  • Evalue 2.80e-226

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1203
ATGGCGAGTAAGCAACTCTGGCGCTGGCGTGGCATAACCGGCGACGGCAATGCGCAAGATGGGATGCTATGGGCAGAGAGCCGTGCTTTGCTGCTCATGACACTACAGCAACAGATGGTTACCCCACTAAGCCTGAAGCGAATCGCCATCAATTCTGCGCAGTGGCGAGGAGATAAAAGCGCGGAAGTCATTCATCAACTGGCGACGCTACTCAAAGCCGGGTTAACGCTTTCTGAAGGGCTGGCTCTGCTGGCGGAACAGCATCCCTGTAAGCAGTGGCAAGCGTTGCTGCAATCACTGGCGCACGATCTTGAACAGGGCGTTGCCTTTTCCAATGCCTTATTACCCTGGTCAGAGGTATTTCCGCCGCTCTATCAGGCGATGATCCGCACGGGTGAACTGACCGGTAAGCTGGATGAATGCTGCTTTGAACTGGCGCGTCAGCAAAAAGCCCAGCGTCAGTTGACCGACAAAGTGAAATCAGCGTTACGTTATCCCATTATCATTTTAGCGATGGCAATCATGGTGGTTGTGGCAATGCTGCATTTTGTTCTGCCGGAGTTTGCCGCTATCTATAAGACCTTTAACACTCCGCTACCGGCGCTAACGCAGGGGATCATGACGCTGGCAAGTTTTAGTGGCGAATGGGGTTGGTTGCTGGTGCTATTCGGCTTTCTGCTGGCGATAGCCAATAAGCTGCTGATGCGCCACCCAACCAGGCTTATCGCACGGCAGAAATTGCTGTTACGCATCCCGATTATGGGTTCACTGATGCGGGGACAAAAACTCACGCAGATCTTTACGATTCTGACACTGACACAAAGTGCAGGCATTTCTTTTTTACAGGGCGTTGAGAGCGTCAGAGAAACAATGCGCTGCCCGTACTGGGTGCAACTTCTGACACAAATCCAGCACGATATCAGTAACGGTCACCCCATCTGGCTGGCGCTAAAAAATGCCGGTGAGTTTAGCCCGCTCTGTTTGCAATTAGTGAGAACAGGAGAGGCATCCGGCTCGCTGGATCTCATGTTAGACAACCTCGCCCATCATCATCGGGATAACACAATGGCGCTGGCGGATAACCTCGCAGCCTTACTGGAACCGGCGTTGCTGATCATAACGGGAGGAATTATCGGTACGCTGGTGGTGGCAATGTATCTGCCAATTTTCCATTTAGGCGATGCGATGAGTGGAATGGGATAA
PROTEIN sequence
Length: 401
MASKQLWRWRGITGDGNAQDGMLWAESRALLLMTLQQQMVTPLSLKRIAINSAQWRGDKSAEVIHQLATLLKAGLTLSEGLALLAEQHPCKQWQALLQSLAHDLEQGVAFSNALLPWSEVFPPLYQAMIRTGELTGKLDECCFELARQQKAQRQLTDKVKSALRYPIIILAMAIMVVVAMLHFVLPEFAAIYKTFNTPLPALTQGIMTLASFSGEWGWLLVLFGFLLAIANKLLMRHPTRLIARQKLLLRIPIMGSLMRGQKLTQIFTILTLTQSAGISFLQGVESVRETMRCPYWVQLLTQIQHDISNGHPIWLALKNAGEFSPLCLQLVRTGEASGSLDLMLDNLAHHHRDNTMALADNLAALLEPALLIITGGIIGTLVVAMYLPIFHLGDAMSGMG*