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NECEvent2014_1_5_scaffold_57_63

Organism: NECEvent2014_1_5_Escherichia_coli_50_33_partial

partial RP 25 / 55 MC: 5 BSCG 25 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(64704..65192)

Top 3 Functional Annotations

Value Algorithm Source
Transcription antitermination protein RfaH n=397 Tax=Escherichia RepID=RFAH_ECOL5 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 328
  • Evalue 3.30e-87
  • rbh
rfaH; transcriptional activator RfaH similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 328
  • Evalue 9.30e-88
Transcription antitermination protein RfaH {ECO:0000256|HAMAP-Rule:MF_00951}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 328
  • Evalue 4.60e-87

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGCAATCCTGGTATTTACTGTACTGCAAGCGCGGGCAACTTCAACGTGCCCAGGAACACCTCGAAAGACAGGCTGTGAATTGCCTGGCACCGATGATCACCCTGGAAAAAATCGTGCGTGGCAAACGTACTGCAGTCAGTGAGCCATTGTTCCCCAACTACTTGTTTGTGGAGTTCGATCCGGAAGTGATTCATACCACGACTATCAACGCGACCCGCGGTGTCAGCCACTTCGTGCGCTTTGGCGCGTCGCCAGCGATAGTCCCATCGGCGGTGATTCATCAGTTATCAGTGTATAAACCGAAAGATATTGTCGATCCATCGACGCCGTATCCTGGTGATAAAGTGATTATTACTGAAGGCGCATTCGAAGGTTTTCAGGCCATTTTCACCGAGCCAGACGGCGAGGCTCGCTCCATGCTATTGCTGAATCTTATTAATAAAGAGATTAAGCACAGTGTGAAGAACACCGAGTTCCGCAAACTCTAA
PROTEIN sequence
Length: 163
MQSWYLLYCKRGQLQRAQEHLERQAVNCLAPMITLEKIVRGKRTAVSEPLFPNYLFVEFDPEVIHTTTINATRGVSHFVRFGASPAIVPSAVIHQLSVYKPKDIVDPSTPYPGDKVIITEGAFEGFQAIFTEPDGEARSMLLLNLINKEIKHSVKNTEFRKL*