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NECEvent2014_1_5_scaffold_94_16

Organism: NECEvent2014_1_5_Escherichia_coli_50_33_partial

partial RP 25 / 55 MC: 5 BSCG 25 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(16462..17673)

Top 3 Functional Annotations

Value Algorithm Source
Drug resistance transporter n=352 Tax=Escherichia RepID=E1PB78_ECOAB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 403.0
  • Bit_score: 797
  • Evalue 6.20e-228
  • rbh
ydhC; inner membrane transport protein YdhC similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 403.0
  • Bit_score: 797
  • Evalue 1.80e-228
Inner membrane transport protein ydhC {ECO:0000313|EMBL:KEJ58799.1}; TaxID=1444220 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 403.0
  • Bit_score: 797
  • Evalue 8.80e-228

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGCAACCTGGGAAAAGATTTTTAGTCTGGCTGGCGGGTTTGAGCGTACTCGGTTTTCTGGCAACCGATATGTATCTGCCTGCTTTCGCCGCCATACAGGCCGACCTGCAAACGCCTGCGTCTGCTGTCAGTGCCAGCCTTAGTCTGTTCCTTGCCGGTTTTGCCGCAGCCCAGCTTCTGTGGGGGCCACTCTCCGACCGTTATGGTCGTAAACCGGTGTTATTCATCGGCCTGACAATTTTTGCGTTAGGTAGTCTGGGGATGCTGTGGGTAGAAAACGCCGCCACGCTGCTGATATTGCGTTTTGTACAGGCTGTGGGTGTCTGCGCCGCGGCGGTTATCTGGCAAGCATTAGTGACAGATTATTATCCTTCACAGAAAGTTAACCGTATTTTTGCGACCATCATGCCGCTGGTGGGTCTGTCTCCGGCACTGGCTCCTCTGTTAGGAAGCTGGCTGCTGGTCCATTTTTCCTGGCAGGCGATTTTCGCCACCCTGTTTGCCATTACCGTGGTGCTGATTCTGCCTATTTTCTGGCTCAAACCCACGACGAAGGCCCGTAACAATAGTCAGGATGGTCTGACCTTTACCGACCTGCTACGTTCTAAAACCTATCGCGGCAACGTGCTGATATACGCGGCCTGTTCAGCCAGTTTTTTTGCATGGCTGACCGGTTCACCGTTCATCCTTAGTGAAATGGGTTACAGCCCGGCAGTTATTGGTTTAAGTTATGTCCCGCAAACTATCGCGTTTCTGATTGGTGGTTATGGCTGTCGCGCCGCGCTGCAGAAATGGCAAGGCAAGCAGTTATTACCGTGGTTGCTGGTACTGTTTGCTGTCAGCGTCATTGCGACCTGGGCTGCGGGCTTCATTAGCCATGTGTCGCTGGTCGAAATCCTGATCCCATTCTGTGTGATGGCGATTGCCAACGGTGCGATCTACCCGATTGTTGTCGCCCAGGCGCTGCGTCCCTTCCCACATGCAACCGGTCGCGCCGCAGCGTTGCAGAACACTCTGCAACTGGGTCTGTGCTTCCTCGCAAGTCTGGTAGTTTCCTGGCTTATCAGTATCAGCACGCCATTGCTCACCACCACCAGCGTGATGTTATCAACAGTAGTGCTGGTCGCTCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCATAGCGAATCACACTGA
PROTEIN sequence
Length: 404
MQPGKRFLVWLAGLSVLGFLATDMYLPAFAAIQADLQTPASAVSASLSLFLAGFAAAQLLWGPLSDRYGRKPVLFIGLTIFALGSLGMLWVENAATLLILRFVQAVGVCAAAVIWQALVTDYYPSQKVNRIFATIMPLVGLSPALAPLLGSWLLVHFSWQAIFATLFAITVVLILPIFWLKPTTKARNNSQDGLTFTDLLRSKTYRGNVLIYAACSASFFAWLTGSPFILSEMGYSPAVIGLSYVPQTIAFLIGGYGCRAALQKWQGKQLLPWLLVLFAVSVIATWAAGFISHVSLVEILIPFCVMAIANGAIYPIVVAQALRPFPHATGRAAALQNTLQLGLCFLASLVVSWLISISTPLLTTTSVMLSTVVLVALGYMMQRCEEVGCQNHGNAEVAHSESH*