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NECEvent2014_1_5_scaffold_613_1

Organism: NECEvent2014_1_5_Escherichia_coli_50_33_partial

partial RP 25 / 55 MC: 5 BSCG 25 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(278..1117)

Top 3 Functional Annotations

Value Algorithm Source
HTH-type transcriptional regulator HdfR n=9 Tax=Escherichia coli RepID=E6AHQ5_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 279.0
  • Bit_score: 559
  • Evalue 1.50e-156
  • rbh
HTH-type transcriptional regulator HdfR {ECO:0000256|HAMAP-Rule:MF_01233}; H-NS-dependent flhDC regulator {ECO:0000256|HAMAP-Rule:MF_01233}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaprote similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 279.0
  • Bit_score: 558
  • Evalue 6.20e-156
hdfR; transcriptional regulator HdfR similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 279.0
  • Bit_score: 555
  • Evalue 6.20e-156

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 840
GTGGATACGGAATTGTTAAAAACTTTCCTGGAAGTTAGCCGAACGCGTCACTTTGGTCGAGCGGCTGAATCGCTCTATCTGACCCAATCAGCCGTGAGCTTTCGAATCAGACAACTGGAAAATCAACTGGGTGTGAATCTTTTCACCCGCCACAGAAACAATATCCGTTTAACCGCTGCCGGAGAAAAGCTTCTGCCTTATGCAGAAACGCTCATGAGCACCTGGCAGGCCGCCCGCAAGGAGGTGGCGCATACCTCACGACATAATGAGTTTTCTATCGGTGCCAGCGCCTCGCTGTGGGAGTGTATGCTTAATCAGTGGCTGGGACGCTTGTATCAAAATCAGGATGTCCATACAGGCTTACAGTTCGAAGCGCGAATTGCCCAACGGCAGTCTCTGGTAAAACAGTTGCATGAACGCCAGCTTGATCTTCTTATTACAACTGAAGCCCCCAAAATGGACGAATTTTGTAGTCAGTTGCTGGGGTATTTCACTTTAGCGCTTTATACCAGTGCCCCTTCTAAACTAAAGGGAGATCTTAACTATCTGCGACTAGAGTGGGGGCCAGATTTTCAACAGCATGAGGCAGGTTTGATCGGTGCTGACGAAGTTCCCATTCTGACAACCAGTTCTGCTGAACTGGCACAGCAACAGATTGCGACGCTTAATGGTTGCACCTGGCTACCCGTCAGTTGGGCACGTAAAAAAGGCGGCCTGCATACCGTTGTCGATAGCACAACACTTTCACGGCCGCTTTATGCCATATGGCTACAAAATAGCGATAAAAATGCGTTGATTCGCGATCTATTGAAAATTAACGTGCTGGATGAAGTGTATTAA
PROTEIN sequence
Length: 280
VDTELLKTFLEVSRTRHFGRAAESLYLTQSAVSFRIRQLENQLGVNLFTRHRNNIRLTAAGEKLLPYAETLMSTWQAARKEVAHTSRHNEFSIGASASLWECMLNQWLGRLYQNQDVHTGLQFEARIAQRQSLVKQLHERQLDLLITTEAPKMDEFCSQLLGYFTLALYTSAPSKLKGDLNYLRLEWGPDFQQHEAGLIGADEVPILTTSSAELAQQQIATLNGCTWLPVSWARKKGGLHTVVDSTTLSRPLYAIWLQNSDKNALIRDLLKINVLDEVY*