ggKbase home page

NECEvent2014_1_5_scaffold_236_8

Organism: NECEvent2014_1_5_Clostridium_butyricum_28_11

near complete RP 52 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: 6603..7202

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S4 n=3 Tax=Clostridium butyricum RepID=B1R2S6_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 199.0
  • Bit_score: 398
  • Evalue 5.50e-108
  • rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1. similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 199.0
  • Bit_score: 396
  • Evalue 2.20e-107
rpsD2; 30S ribosomal protein S4 B similarity KEGG
DB: KEGG
  • Identity: 79.8
  • Coverage: 198.0
  • Bit_score: 324
  • Evalue 2.20e-86

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 600
GTGGCAAAAATGATGGGACCAAGATTTAAGTTATGTAGAAGATTAGGATTAAACGTAAACGGTCATCCTAAAGCAATGAAAAGAGCTGGAAATGGCAGCGCTAGAGATTCAAAAAAATTATCACCTTATGGTACACAACTATTAGAAAAGCAAAGATTAAGAGCTTATTATGGTGTAATGGAAAAGCAATTTGCAACTTACGCAAGAAAAGCATTTAAAGATAAAGACCAAACAGGCTATGCCCTTATTAAAAGACTTGAATGCAGACTTGATAATATAGTTTTTAGACTTGGATTTGCAAGTTCACTAGCACAAGCTAGACAAATGGTTGTTCATGGACATATTTTAGTTAATGGAGAAAAGGTAAATATACCATCTTTCAATGTTAATATTGGTGATGTTGTTGCTTTAAGAGAAAAATCTCAAAAGAATGAAATGTTCAGAGATAATTTCTTATCTAACATACTTAATGTTTATCCTTATTTAACAAAGAATGAAGCTGAATTTTCAGGAAGCCTTTTAAGATATCCTGAAAGAAGTGAAGTTCCAATTCAAATTAATGATTCATTAGTAGTAGAATACTACTCAAAATTATTCTAA
PROTEIN sequence
Length: 200
VAKMMGPRFKLCRRLGLNVNGHPKAMKRAGNGSARDSKKLSPYGTQLLEKQRLRAYYGVMEKQFATYARKAFKDKDQTGYALIKRLECRLDNIVFRLGFASSLAQARQMVVHGHILVNGEKVNIPSFNVNIGDVVALREKSQKNEMFRDNFLSNILNVYPYLTKNEAEFSGSLLRYPERSEVPIQINDSLVVEYYSKLF*