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NECEvent2014_1_5_scaffold_154_19

Organism: NECEvent2014_1_5_Clostridium_butyricum_28_11

near complete RP 52 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: comp(20833..21135)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Clostridium butyricum RepID=M8K2I9_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 200
  • Evalue 8.40e-49
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 100.0
  • Bit_score: 200
  • Evalue 1.20e-48
RNA polymerase, sigma 28 subunit, FliA/WhiG similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 100.0
  • Bit_score: 173
  • Evalue 2.40e-41

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 303
CTAGAAAGTGTTATATTTTCTGATGATGAGGATGTAAATCTAATGGGAGTTATCGAAGATAAAAATAGCCCAAGTCCCCATTCATATTTAGAAGATAAGGAAAAGCTTGAGATATTGACTCAAGCAATTGAACTTTTAAAAGAAAAAGATAGAATGATATTAAATTTATATTATTATGAAGGCTTAACACTTAAAGAAATAGGTAAAATTCTTGAAGTATCAGAATCAAGAGTATGCCAACTACATAGTAGATCTATCCGCAATTTAAGAGAATGTATGAAAAAACTTCACTATGTAGATTAA
PROTEIN sequence
Length: 101
LESVIFSDDEDVNLMGVIEDKNSPSPHSYLEDKEKLEILTQAIELLKEKDRMILNLYYYEGLTLKEIGKILEVSESRVCQLHSRSIRNLRECMKKLHYVD*