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NECEvent2014_1_5_scaffold_493_2

Organism: NECEvent2014_1_5_Clostridium_butyricum_28_11

near complete RP 52 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: comp(216..956)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K3T3_CLOPA similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 233.0
  • Bit_score: 161
  • Evalue 1.40e-36
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 39.5
  • Coverage: 233.0
  • Bit_score: 161
  • Evalue 3.90e-37
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.; similarity UNIPROT
DB: UniProtKB
  • Identity: 39.5
  • Coverage: 233.0
  • Bit_score: 161
  • Evalue 1.90e-36

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Taxonomy

Clostridium pasteurianum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 741
ATGACCAATGAAGAGTTGATTAAAAAATATAATGATGGTGACAGTTCAGCTTTAGATATTTTGATAGAAAACAATGAAAAACTAGTGAAGTATGTAGTAAATAAATATTCGGTTGATAAATATCCGAGCATGGATGAAGATGATTTAATACAAGAAGGAAGAATCGGACTATATATTGCAGCAACAAAGTTTGATATAGAATCAGATTTTAAGTTTTCTACTTATGCTTTTTTCTGGATTAAGCAAAGGATAAGCAGATATGTGAAGCAAAAGAGTACATATAACGAAGTTTCTCTAAATAAAAAGATTGGTGATGATTCTAATGAAATGGAACAAATTATAGGCATAGAGGATTCAGAAATAGATAAGGTTGAAGATACATTATGCAATAAGAATCTTAGGACAAGCCTTCAATTTTTAATTAATCATTACCTAAATAAAAAAGAAAAAGAAATAATTGAATTAAAATACGGGTGGAATGGTGATCCACTTAATTTTAGTCAAATAAGTAATAGATTTAATATTTCAGCTACTGCAGTTAGAGATTCACATAATAAGGCATTATGGAAGTTAAGACGAACTGAATTTATAAGGAATATGATTGCAGAAGAAGATAAAGAGAATAAATACAATAATTACAATTCAATTATAAAGTATATTGATAAAAAAGAACGGGAAGGAAAAACTAATACCTTTAATTTGAATGTTATAAAAGATAATCAGATTTTTAGTTTAATTTAG
PROTEIN sequence
Length: 247
MTNEELIKKYNDGDSSALDILIENNEKLVKYVVNKYSVDKYPSMDEDDLIQEGRIGLYIAATKFDIESDFKFSTYAFFWIKQRISRYVKQKSTYNEVSLNKKIGDDSNEMEQIIGIEDSEIDKVEDTLCNKNLRTSLQFLINHYLNKKEKEIIELKYGWNGDPLNFSQISNRFNISATAVRDSHNKALWKLRRTEFIRNMIAEEDKENKYNNYNSIIKYIDKKEREGKTNTFNLNVIKDNQIFSLI*