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NECEvent2014_1_5_scaffold_572_3

Organism: NECEvent2014_1_5_Clostridium_butyricum_28_11

near complete RP 52 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: 1652..4006

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=997898 species="Bacteria; Fi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 785.0
  • Bit_score: 1545
  • Evalue 0.0
mfd; transcription-repair-coupling factor Mfd (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 785.0
  • Bit_score: 1333
  • Evalue 0.0
Transcription-repair-coupling factor n=2 Tax=Clostridium butyricum RepID=M8JEP6_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 785.0
  • Bit_score: 1545
  • Evalue 0.0
  • rbh

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2355
ATGAGATTGAAGGGGTTATTAGAGCCCTTTGAAAATAGTGTTGAATTTGAAAATATATTAGGAAGTATTAATAACGAAAGATATCCTATTGGTATATATGGAATTGCTGAATCGGGAAGAGTTTATACTATTGATAGTATCTTTGAAAATATAGATAGATCTATGGTAATAGTTACTCAAAGTGATATGGAAGCTAAAAATATATATGAGGATTTATTGTTATATACTAATGATGTTCACTATTTTCCAGCGAAGGAAATGGTTTTCTATAATATAGATGCTATTTCGGGTGATTTAAGATGGGCGAGACTAAAAGTTATAAATGAAATTTTAAAAAAGAAGAAAAAGATAATAGTAACCTCAATAGATGCTTTTTCAGCAAGATACACTCCTCATAAATTGTTTGCAGATTATACAATGAAGTTTAAAGAAAGCGATGAAATAAACCTCATTGAAGTATCTAAAAAACTTATACAATCGGGTTATGAGAGAGTTGAAATGGTTGAAGGAAAGGGGCAGTTCGCATTGAGAGGGGGAATACTTGATGTATTTCCTACATGTTCGGCTTATCCTTATAGAATTGAACTTTTCGGTGATGAAATTGACTCTATAAGAACTTTCAATACAGAATCACAGAGAAGTATTGATAAAGTTAAGAGGATAGAGGTATTTCCAGCAAAAGAAATAATAATAACAGATGAAACTATTTCTTTAGGTAAAGAAAAGTTAAAAAAAGAATTTGATAATATATCAAAAAGTGATACTGATTCAGCTAGGGTAGAAAAATTAAGAAATATATTAAATAAAAACTTAGAATCATTGGAAGAAACTTCAACATTTGAAACTATAGATAGTTATCTTCCTTATTTCTGCAAAGAAACAGAAAGTCTTTTTGATTATCTTAAGGATTGTTTATTTATAATTGATGATGTTCAAAGGTGCGAAGGAAAACTTGATTCAACATATTTAGAATTTGAAGAGAACTTTACTGCATTTTCTCAAAGGGGAGATATATTTCCGAAACAAGGTGAACTTTTAATAAGCAAAGAGGAAGTAATTGAATCTTTTAAAGATAAAAAAGTTGTATTTTTAGATGGATTGGTTAAGAAAAATTCATGGTTTAATCCATATACAACAGTTAATATTTCAGAAAGAACATTAAATAACTATCAAGGTCAGTTGGATTTATTAATAGATGAAATATCTGATAAGAAAAATCAAGGATACAAGATAGTAATTTTATCAGGAACAAGGGCTAGGGGCGAACGTTTAGTAGGAACTTTAAGAGATAGAGGTATAGAAAGTTCTTATAAAGACACAGTTGATAATATTCAATATGGTGAAGTTGTAATTACATTTGGTAACCAACTTCATGGTTTTCAATATCCTGAATATAAAGTTTGCGTAATATCAGATAAAGAAGTTTTTGGAGAAGCTAAAAGAAAGCTTAAGAAAACTAAATCAAAGAGAAAAGGTATTGCCAAAATAAAAAGCTTTGCTGAATTAAAACCTGGTGATTATGTAGTACATGCAAATCATGGAATAGGTGTTTATAAGGGAATAAAGCAAATAGAAGTTGCTGGTCATAAGAGAGATTACCTTGATATTGTTTATGATAAAGGTGATAAGTTATATGTTCCTGTAGACCAACTTGATTTAATTCAAAAATATGTAGGTAGTGAAGGAAAAAGTCCTAAGGTAAATAAACTTGGAAGTGCTGAATGGCAAAAGGCTAAAGCGAAAGTAAGAAAATCTATTAATGAAATTGCTGAGGATTTAGTAAAATTATATGCTATGAGAACTACAGTAAAAGGACATAAATTTTCAAAGGATACTCAATGGCAGAAACAATTTGAAGATGAATTTCCATACGATGAAACTCCAGATCAATTAACTTCGTTAGAAGAAATAAAAGCTGATATGGAATCAGATAAACCTATGGATAGACTTTTATGTGGAGACGTAGGATATGGAAAAACCGAAGTGGCTTTAAGGGCAGCTTTTAAAGCAGTTATGGATGGAAAGCAAGTTGCACTTCTTGTTCCAACTACAATTTTAGCAGAACAGCATTATAAAAATATGAAAAATAGATTTTCAGACTTTCCTATAAAAATAGATATGGTAAGTAGATTTAGAAGTGCTAAAGAGCAGAAAGAAACCCTTCAGAAAGTAAAAGAAGGAAATATTGATATTCTTGTGGGGACTCACAGACTTGTATCAAAAGATATTCAATTTAAAGATTTAGGACTTTTAATTGTTGATGAAGAGCAGAGATTTGGAGTAAAACAAAAAGAGAAAATTAAAAATATTAAGAAGAATGTAGATGTACTGACATTAAGTGCAACACCAATACCT
PROTEIN sequence
Length: 785
MRLKGLLEPFENSVEFENILGSINNERYPIGIYGIAESGRVYTIDSIFENIDRSMVIVTQSDMEAKNIYEDLLLYTNDVHYFPAKEMVFYNIDAISGDLRWARLKVINEILKKKKKIIVTSIDAFSARYTPHKLFADYTMKFKESDEINLIEVSKKLIQSGYERVEMVEGKGQFALRGGILDVFPTCSAYPYRIELFGDEIDSIRTFNTESQRSIDKVKRIEVFPAKEIIITDETISLGKEKLKKEFDNISKSDTDSARVEKLRNILNKNLESLEETSTFETIDSYLPYFCKETESLFDYLKDCLFIIDDVQRCEGKLDSTYLEFEENFTAFSQRGDIFPKQGELLISKEEVIESFKDKKVVFLDGLVKKNSWFNPYTTVNISERTLNNYQGQLDLLIDEISDKKNQGYKIVILSGTRARGERLVGTLRDRGIESSYKDTVDNIQYGEVVITFGNQLHGFQYPEYKVCVISDKEVFGEAKRKLKKTKSKRKGIAKIKSFAELKPGDYVVHANHGIGVYKGIKQIEVAGHKRDYLDIVYDKGDKLYVPVDQLDLIQKYVGSEGKSPKVNKLGSAEWQKAKAKVRKSINEIAEDLVKLYAMRTTVKGHKFSKDTQWQKQFEDEFPYDETPDQLTSLEEIKADMESDKPMDRLLCGDVGYGKTEVALRAAFKAVMDGKQVALLVPTTILAEQHYKNMKNRFSDFPIKIDMVSRFRSAKEQKETLQKVKEGNIDILVGTHRLVSKDIQFKDLGLLIVDEEQRFGVKQKEKIKNIKKNVDVLTLSATPIP