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NECEvent2014_1_5_scaffold_674_2

Organism: NECEvent2014_1_5_Clostridium_butyricum_28_11

near complete RP 52 / 55 MC: 4 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 2
Location: 356..1114

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=5 Tax=Clostridium butyricum RepID=B1QYS2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 456
  • Evalue 1.30e-125
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 252.0
  • Bit_score: 495
  • Evalue 5.80e-137
sporulation sigma factor SigE similarity KEGG
DB: KEGG
  • Identity: 93.6
  • Coverage: 235.0
  • Bit_score: 433
  • Evalue 5.50e-119

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Taxonomy

Clostridium sp. IBUN13A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 759
ATGAGTTTAACGCATTATTATCAAGAGGAATTTTGTAGGGAGGATATATGTATGGAGAAATTAATTCTGTTTTTTAATAAGCTATTGAGTAAATTCAAATTATTTAGCAGGAATTTATTTTATGTTGGAGGTAATGACGCTCTGCCACCTCCTTTATCTAAGGATGAAGAAGAAGAATTATTAAAAAAATTAAACAATGGTGATGAAAAAATAAGAAGTACATTAATTGAAAGAAATTTAAGATTAGTAGTCTATATAGCACGCAAATTTGAAAATACAGGTGTTTATGTTGAAGATTTAATATCTGTTGGTACTATAGGATTAATTAAAGCAGTTAATACATTTAATCCTGAGAAGAAAATTAAACTGGCAACGTATGCATCACGTTGTATAGAAAATGAAATTTTAATGTATTTAAGAAGAAATAGCAAGGTTAAAGCAGAAATATCATTTTATGAACCTTTAAATATTGACTGGGATGGAAATGAACTTTTACTTTCAGATATTTTAGGGACAGAAAATGATACTGTATATAATCTAATTGAAGATGAAGTAGATAAACAACTTTTATTTATGGCATTAAAAAGTTTAAATGATAGAGAAAAAGAAATTGTACGATTAAGATTTGGTTTAAATGGAGCAAGAGAAAAAACTCAGAAAGAAGTGGCGGATATGCTTGGTATATCTCAGTCTTATATATCTAGATTAGAGAAAAAAATAATTAAAAGATTGAAAAAAGAAATAAATAGAATGATTTAG
PROTEIN sequence
Length: 253
MSLTHYYQEEFCREDICMEKLILFFNKLLSKFKLFSRNLFYVGGNDALPPPLSKDEEEELLKKLNNGDEKIRSTLIERNLRLVVYIARKFENTGVYVEDLISVGTIGLIKAVNTFNPEKKIKLATYASRCIENEILMYLRRNSKVKAEISFYEPLNIDWDGNELLLSDILGTENDTVYNLIEDEVDKQLLFMALKSLNDREKEIVRLRFGLNGAREKTQKEVADMLGISQSYISRLEKKIIKRLKKEINRMI*