ggKbase home page

NECEvent2014_1_5_scaffold_240

Alias: 1014A0615_scaffold_240

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_1_5_scaffold_240_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..1461)
DNA (1461bp) protein (487aa)
Tail component of prophage n=7 Tax=Escherichia coli RepID=E2QKR7_ECOLX
putative phage tail length tape measure protein
Phage tail tape measure protein, lambda family {ECO:0000313|EMBL:ESD32124.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
NECEvent2014_1_5_scaffold_240_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1454..1888)
DNA (435bp) protein (145aa)
Tail component of prophage n=22 Tax=Escherichia coli RepID=E2QKR6_ECOLX
Minor tail protein T
Phage tail assembly protein T {ECO:0000313|EMBL:ESD32125.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_1_5_scaffold_240_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1870..2292)
DNA (423bp) protein (141aa)
Tail component of prophage n=30 Tax=Escherichia coli RepID=E2QKR5_ECOLX
putative tail component of prophage CP-933X
Phage minor tail protein G {ECO:0000313|EMBL:ESD32126.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_1_5_scaffold_240_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2308..3048)
DNA (741bp) protein (247aa)
Tail component of prophage n=32 Tax=Escherichia coli RepID=E2QKR4_ECOLX rbh
tail component of prophage
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:ESD32127.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
NECEvent2014_1_5_scaffold_240_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3056..3451)
DNA (396bp) protein (132aa)
Tail component of prophage n=31 Tax=Escherichia coli RepID=E2QKR3_ECOLX
tail component of prophage
Phage minor tail protein U {ECO:0000313|EMBL:ESD32128.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_1_5_scaffold_240_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3448..4026)
DNA (579bp) protein (193aa)
Tail fiber component Z of prophage n=27 Tax=Escherichia coli RepID=E2QKR2_ECOLX rbh
putative minor tail protein rbh
Prophage minor tail protein Z {ECO:0000313|EMBL:ESD32129.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
NECEvent2014_1_5_scaffold_240_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4038..4391)
DNA (354bp) protein (118aa)
Tail attachment protein n=123 Tax=Escherichia coli RepID=E2QKR1_ECOLX
tail attachment protein
Phage Head-Tail Attachment family protein {ECO:0000313|EMBL:EHW77948.1}; TaxID=868181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_1_5_scaffold_240_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4403..4798)
DNA (396bp) protein (132aa)
DNA packaging protein ofprophage CP-933X n=33 Tax=Escherichia coli RepID=E2QKR0_ECOLX
DNA packaging protein from bacteriophage origin
Uncharacterized protein {ECO:0000313|EMBL:ESD32131.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_1_5_scaffold_240_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4840..5865)
DNA (1026bp) protein (342aa)
Capsid protein of prophage n=46 Tax=Escherichia coli RepID=E2QKQ9_ECOLX rbh
capsid protein of prophage
Phage major capsid protein E {ECO:0000313|EMBL:ESD32132.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
NECEvent2014_1_5_scaffold_240_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5921..6253)
DNA (333bp) protein (111aa)
Head decoration protein (Major capsid protein) n=124 Tax=Escherichia coli RepID=E2QKQ8_ECOLX
head decoration protein (Major capsid protein D) from bacteriophage origin
Head decoration protein (Major capsid protein D) from bacteriophage origin {ECO:0000313|EMBL:AEQ12601.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enter
NECEvent2014_1_5_scaffold_240_11
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6263..7594)
DNA (1332bp) protein (444aa)
Capsid protein of prophage n=34 Tax=Escherichia coli RepID=E2QKQ7_ECOLX rbh
Minor capsid protein C from bacteriophage origin rbh
Minor capsid protein C {ECO:0000313|EMBL:EOW66122.1}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp
NECEvent2014_1_5_scaffold_240_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7575..9176)
DNA (1602bp) protein (534aa)
Capsid structural protein of prophage n=37 Tax=Escherichia coli RepID=E2QKQ6_ECOLX rbh
Portal protein B {ECO:0000313|EMBL:EQP56865.1}; TaxID=1281011 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH
capsid structural protein of prophage
NECEvent2014_1_5_scaffold_240_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9173..9379)
DNA (207bp) protein (69aa)
Lambda prophage-derived head-to-tail joining protein W n=703 Tax=root RepID=VHTJ_ECOL6
Lambda prophage-derived head-to-tail joining protein W
GpW {ECO:0000313|EMBL:EGI47277.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
NECEvent2014_1_5_scaffold_240_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9376..11301)
DNA (1926bp) protein (642aa)
Large terminase n=10 Tax=Escherichia coli RepID=L3EXT7_ECOLX rbh
Phage terminase large subunit {ECO:0000313|EMBL:ESD32137.1}; TaxID=1268991 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheri
putative terminase large subunit
NECEvent2014_1_5_scaffold_240_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11276..11821)
DNA (546bp) protein (182aa)
Terminase small subunit n=116 Tax=root RepID=TERS_LAMBD rbh
terminase small subunit
Terminase small subunit {ECO:0000313|EMBL:AIF59992.1}; TaxID=340184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_1_5_scaffold_240_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12298..12651
DNA (354bp) protein (118aa)
Uncharacterized protein n=212 Tax=Escherichia RepID=E1PJH4_ECOAB
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKI04250.1}; Uncharacterized protein {ECO:0000313|EMBL:AJO83101.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enter
NECEvent2014_1_5_scaffold_240_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12774..13100)
DNA (327bp) protein (109aa)
Escherichia coli IMT2125 genomic chromosome, IMT2125 n=419 Tax=Escherichia RepID=E2QKQ2_ECOLX
tonB-like membrane protein
TonB family domain-containing protein {ECO:0000313|EMBL:ELE61756.1}; TaxID=1182683 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
Displaying 17 items

View Taxonomy