ggKbase home page

NECEvent2014_2_1_scaffold_937_1

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: comp(2..2500)

Top 3 Functional Annotations

Value Algorithm Source
Collagen adhesion protein n=2 Tax=Clostridium perfringens RepID=H7D089_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 833.0
  • Bit_score: 1661
  • Evalue 0.0
  • rbh
Collagen adhesion protein {ECO:0000313|EMBL:EDT14567.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JG similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 833.0
  • Bit_score: 1661
  • Evalue 0.0
cna; collagen adhesin similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 860.0
  • Bit_score: 518
  • Evalue 4.30e-144

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2499
GTAGTATTCAATGACATTAAGCCAGGAGAATACATCATCGAAGAAGTCGAAGCTCCTTTAGGATATTTAATTACTAATCCAGTTAATATTACTGTAAAACCTAATAAAGTAACTACTGCTGAAATGGTTGATACTCAAATAAAAGGAAGAGTAGAAATAACAAAAATTGATGAAGAAACTGGCGAACCAATTTCAGGTGCTGAATTTGAGATGGTGAAGGCTGATAATAACGAAGTAGTTGAGAAAATGACTACAGGAGAAAATGGAAAGGTATTAAGTGGGTTACATCCTTTTGGAAACTACATTGTAAGAGAAACAAAAGCCCCAAGTAAATATGTGCTTAATGGTAAAGAATATCCAGTTACTATTAATGAACATATGAAAACAATAGAAATTACTCATGCTAATAGAAAAATTAAGGGTAGAGTTTCAATACACAAAATCGATGAAGAAATGCCAGAACTTAGTTTAAAAGGTGCTGTACTTGGTATTTATGATGATGCAGGTAATGAAGTTGATAGATTAACAACTGACGAAAAGGGAGCTGCAACAAGTAAGTATCTAGATTATGGTCACTATATTGGTAAAGAGCTACAAGCTCCAGAAGGTTACAAGTTAAGTGATAAAACTATAGACATAAACATAACTGAAGATGATAAAGTTTATTCTTATGACTTTACTAACAAAGTTATGAAAGGTCGCATTCAAATAGTTAAAGTTGATAGTGAAAACGAAGAAAAACCAGTTGCTAACGCAGGTTTTAAAGTTGTTGCAGTTAATGTTAATGGTATAGAACCAGGAACTACTGTAGATAAAGTTAAAACTGATGAAAATGGATTTGCATTTACTAAGGATCTTAGATATGGAGTGTACAAATTCATTGAAGATGAAACTCCAGAAGGATATTGGGCTAGTGATAAGGAATACACAATTAACATAAATGAAGATAATAAAGTTTATGTTAAATACGTTAAAAACGCTCCTATCCAAGCTAAGTTAAGAGTTGTTAAAGTTGACTCTAAAGACAATAAACCACTAGAAGGAGTTAAATTCCAAGTTAGAAATAATGATACTAATAAGCTTGTAGAGTTTACAAACTTTGTAGGAATAATTCCTCATAAAACAACTACTTTAACAACTGATAAGAATGGAGAAATAATAACTCCACAACACTTAGCATACGGAAATTATCAATTGGAGGAGGCAAAACCTAAGGATGGTTATATAAGCATAAAGCCAATACCTTTTAAAATAGACGAAAATGCCGCTCTAGAAGATATTAAGGACTTAGGTACTGTTTATACTATTAAGGTATCTAACGACCGTATAACAGGCGATATGGAGCTTTTAAAGGTAGACAGTGAAACTAAAGAACCATTAGCTGATATTGAATTTAAAGTTACAGCTTTAGATGGCCTAATGAAAGGACAAACTTGGGACTTAAAGAGTAATGACAAAGGAATAGTTAGTTTAAAAGGTTTAGAATATGGCCATTACAAAATAGAAGAAGTTAAAACACTTTGGAATTACGTTATTAACAAAGAGCCTATTTTCTTTGATGTTAAAGAAAATGGTCAAGTAATTAAGCTTGAAATGGAAAATAAAAAGATAAGAGCTAATGCAGAATTAATCAAGGTAGATTCAGAAACTAAAAGACCACTTGAAGGGGCTGAGTTTGAACTTTGGAATGGTGAAAAGCTTGTAGGAAATTACACAACTAACAAAGATGGAAAAATAGTAGTTGAAAACTTAGAAGCAGGTAACTATTATTTCAACGAAATTAAAGCTCCAGATCATTACGAAATAAATCAAGATCAAGATTTAAGTTTTGTAATAGATAAAGACGGTGAAACTAAGACTGTAACTGCAGAAAATAAAGTTAAAACTGGAGAAGTAGACTTTACTAAAACTGATGTTACAAATGGACAAAATATTGAAGGGGCTAAAATAGAGATAGTAGGAATAGAAGAACAAAACAAACATGTTAAATTTGAATTTACTTCAAGTTTAGCTGGCAATAAATTCACTTTACCAGAAGGTAAATATGAGTTTAGAGAAACTCAACAACCGGAAGGATACGAGCTTTCTACTGAAGTTGGAACTTTTGAAATTAAAGGTGGAGAAATTATAAAGGCCAACTTAAAGAATGAAAGAACTACAGGAAAACTTATCTTTACTAAGACAGATGTTGCTACAGGAGAAGTTCTTGAAGGAGCTAAAATAAAAATTGAATGTCTTTCTGGCTTAGATAAAGGAAAGGTTATTGAGTTTATTTCTTCAAAGAATGGAAATGAGTTTGAATTAGCAGCTGGAGAATACAAAATCTCAGAAACTCAAGCTCCAGAAGGATATGAGCTTACAACTGAAACTGGAACCTTTAAAATAGGTGAACATGGTGAAGTAGTTAAGTGTAACTTAACTAACAAGAAATTTGAAATTGTTAAAACTGGTTCAAGCATAGATGTTAATGCATTAATTCCATTTGGAATTATCTTAGTA
PROTEIN sequence
Length: 833
VVFNDIKPGEYIIEEVEAPLGYLITNPVNITVKPNKVTTAEMVDTQIKGRVEITKIDEETGEPISGAEFEMVKADNNEVVEKMTTGENGKVLSGLHPFGNYIVRETKAPSKYVLNGKEYPVTINEHMKTIEITHANRKIKGRVSIHKIDEEMPELSLKGAVLGIYDDAGNEVDRLTTDEKGAATSKYLDYGHYIGKELQAPEGYKLSDKTIDINITEDDKVYSYDFTNKVMKGRIQIVKVDSENEEKPVANAGFKVVAVNVNGIEPGTTVDKVKTDENGFAFTKDLRYGVYKFIEDETPEGYWASDKEYTININEDNKVYVKYVKNAPIQAKLRVVKVDSKDNKPLEGVKFQVRNNDTNKLVEFTNFVGIIPHKTTTLTTDKNGEIITPQHLAYGNYQLEEAKPKDGYISIKPIPFKIDENAALEDIKDLGTVYTIKVSNDRITGDMELLKVDSETKEPLADIEFKVTALDGLMKGQTWDLKSNDKGIVSLKGLEYGHYKIEEVKTLWNYVINKEPIFFDVKENGQVIKLEMENKKIRANAELIKVDSETKRPLEGAEFELWNGEKLVGNYTTNKDGKIVVENLEAGNYYFNEIKAPDHYEINQDQDLSFVIDKDGETKTVTAENKVKTGEVDFTKTDVTNGQNIEGAKIEIVGIEEQNKHVKFEFTSSLAGNKFTLPEGKYEFRETQQPEGYELSTEVGTFEIKGGEIIKANLKNERTTGKLIFTKTDVATGEVLEGAKIKIECLSGLDKGKVIEFISSKNGNEFELAAGEYKISETQAPEGYELTTETGTFKIGEHGEVVKCNLTNKKFEIVKTGSSIDVNALIPFGIILV