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NECEvent2014_2_1_scaffold_1027_4

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: 1786..2289

Top 3 Functional Annotations

Value Algorithm Source
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 339
  • Evalue 7.20e-91
DNA-directed RNA polymerase subunit beta {ECO:0000255|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000255|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 339
  • Evalue 3.60e-90
DNA-directed RNA polymerase subunit beta n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=RPOB_CLOPS similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 168.0
  • Bit_score: 339
  • Evalue 2.50e-90

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 504
ATGGTACATCCTGTCCAAGTTGGAAAAAGAACGAGAATGAGCTTTGCAAAAGTCAAAGACGTGGCTGAAATGCCAAACCTAATTGAAATTCAATTAGATTCTTACAAATGGTTTTTAGATGCAGGACTTTATGAAGTTTTTGATGATATTAATCCTATCTCAAACTTTACTGGAAATCTTGTACTTGAGTTTGTAGGGTACACTCTAGATATGGATAACATAAAATATTCAGTTGAAGAGTGTAAAGAAAGAGACACTACTTATGCTGCACCGCTAAAAGTAGCTGTAAGACTTCAAAACAAAGAAACTGGAGAAATAAAAGAACAAGAGGTATTTATGGGAGATTTCCCATTAATGACAGAGCAAGGAACTTTTATAATCAATGGTGCCGAAAGAGTTATTGTTTCTCAGTTAGTAAGATCACCAGGTGTTTACTACAATTATAATGTAGATAAAACTGGTAAAAAACTGTTCTCTGCAACAGTAATACCTAACAGAGGTGCA
PROTEIN sequence
Length: 168
MVHPVQVGKRTRMSFAKVKDVAEMPNLIEIQLDSYKWFLDAGLYEVFDDINPISNFTGNLVLEFVGYTLDMDNIKYSVEECKERDTTYAAPLKVAVRLQNKETGEIKEQEVFMGDFPLMTEQGTFIINGAERVIVSQLVRSPGVYYNYNVDKTGKKLFSATVIPNRGA