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NECEvent2014_2_1_scaffold_2696_3

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: 518..1102

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S3 n=11 Tax=Clostridium perfringens RepID=RS3_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 383
  • Evalue 1.40e-103
  • rbh
rpsC; 30S ribosomal protein S3 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 383
  • Evalue 3.80e-104
30S ribosomal protein S3 {ECO:0000255|HAMAP-Rule:MF_01309}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 195.0
  • Bit_score: 383
  • Evalue 1.90e-103

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 585
ATGGGACAAAAAGTACATCCTCACGGACTAAGAGTTGGTGTAATTAAAGATTGGGATGCAAAATGGTATGCTGATAAGAAAAATTTTGCTGATAACTTAATCGAAGACCAACAAATAAGAAAATTCATAAAGAAAGAACTTTTCTCAGCTGGAATCGCTAAGATTGAAATCGAAAGATCAGCTAAAAGAGTTAAGTTAAATATACACACAGCTAAGCCAGGTGTAATCATCGGAAAAGGTGGTTCAGGAATCGAAAGATTAAAAGCTAGCTTAAAAAATATAATAGCTGAGAAAAATGTTTTAATAAACATTGTTGAGGTTAAGAACGCTGAAACTAACGCTCAATTAATGGCTGAAAACATTGCTGCTCAATTAGAAAAGAGAATATCATTCAGAAGAGCTATGAAGCAAACTATCCAAAGAGCAATGAAAGCTGGCACATTAGGTGTTAAAACTGCTTGTTCAGGAAGATTAGGTGGAGCTGAAATAGCAAGAACTGAGCAATACAATGAAGGAACAATCCCACTACAAACAATAAGAGCTGACATCGACTATGGATTTGCTGAAGCTGATACAACTTACGGT
PROTEIN sequence
Length: 195
MGQKVHPHGLRVGVIKDWDAKWYADKKNFADNLIEDQQIRKFIKKELFSAGIAKIEIERSAKRVKLNIHTAKPGVIIGKGGSGIERLKASLKNIIAEKNVLINIVEVKNAETNAQLMAENIAAQLEKRISFRRAMKQTIQRAMKAGTLGVKTACSGRLGGAEIARTEQYNEGTIPLQTIRADIDYGFAEADTTYG