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NECEvent2014_2_1_scaffold_1637_2

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: comp(721..1446)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=3 Tax=Clostridium perfringens RepID=Q0TM23_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 472
  • Evalue 2.80e-130
  • rbh
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 472
  • Evalue 7.80e-131
Probable transcriptional regulator {ECO:0000313|EMBL:BAB82333.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 472
  • Evalue 3.90e-130

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 726
ATGTTTAAGAGAAGCAGGGGCATAGCCCTGTATCATCAATTAGAAACAGAGCTAATTGATCTTATAAATAGCGGAGAACTTAAGGAAAATGATAAGTTACCATCTGAAAGAGAATTATGTGAGCAATATAATGTTAGTAGAACAACAGCTAGGCAAGCCATTGGAGAATTAGAAAGAAAAGAGTATGTATATAAGGTCCATGGAAAGGGAACTTTTATATCTCCTAAAGTGTATAAACAACAATTATTAAAATTTTATAGTTTTACTGAAGAAATGAAAAAGCTTGGGAAAAATCCATCTTCAAAAATATTATCTTTTGATTTAATAAGAGCTGACAATAAGATTTCTGAAAAATTAAAAGTGGAAGAAAACTCACTGGTATATAAGATAGTAAGACTAAGAATAGCAGATGAAGTTCCAATGATGGTAGAGTGTACTTATTTACCTGAATATAGATTTATTGATTTAAAAGAGAAGATGCTTAAAGAAAAGCCTATGTATGATATATTTAGAGAAGTTTATAATGTTAGTCTAACTAAGGCTAAGGAAAGTTTTAAACCAATATTAATTTCAAAGAGTGATTCAAAATTATTAAATGTGGAAGATGGTACAGCTGCAATGAGAATTGAAAGAGTTACCTTTGAAAATGAAAGAGTTATAGAGTATACAGTAAGTGTTTCAAGAGGAGATAAATTTGAATATACTGTAGTTTTAGAAGAAGATTAA
PROTEIN sequence
Length: 242
MFKRSRGIALYHQLETELIDLINSGELKENDKLPSERELCEQYNVSRTTARQAIGELERKEYVYKVHGKGTFISPKVYKQQLLKFYSFTEEMKKLGKNPSSKILSFDLIRADNKISEKLKVEENSLVYKIVRLRIADEVPMMVECTYLPEYRFIDLKEKMLKEKPMYDIFREVYNVSLTKAKESFKPILISKSDSKLLNVEDGTAAMRIERVTFENERVIEYTVSVSRGDKFEYTVVLEED*