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NECEvent2014_2_1_scaffold_1846_3

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: comp(719..1426)

Top 3 Functional Annotations

Value Algorithm Source
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 453
  • Evalue 2.80e-125
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 453
  • Evalue 1.40e-124
DNA-directed RNA polymerase subunit beta' n=10 Tax=Clostridium perfringens RepID=RPOC_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 235.0
  • Bit_score: 453
  • Evalue 9.90e-125

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 708
GGATTAGCAATTGTAAGTGAAGTTGCAGGTACTGTAAGAATAGAAGAAACTAAGAAGAAGAGAACTGTTTATGTTGTTACTGATTCAGGAGAAGAATATAGCTATGACATACCATTTGGATCAAGATTAAAAGTTAAAGATGGTATAGCTATTGGAGCTGGAGATGAAATAACAGAAGGTTCAGTTAACCCACATGATATCATGAGCATTAAGGGCGTTGATGGTGCAAGAGAATACTTACTTTCAGAAGTTCAAAAAGTTTACAGACTTCAAGGGGTTGATATCAACGATAAGCACTTAGAAGTTGTAGTTAGACAAATGACTAGAAAGATAAAAGTAACAGAGCAAGGTGATACTAATTTATTACCAGGTGTAATGATTGATATGTTCGATTTCAGAGCTGAAAATGAAAGAGTTGAAAGCTTTGGAGGAGAAAAAGCTCAAGGAGATATAGTTCTTCTTGGTATTACTAAAGCAGCTCTTGCTACAGATAGTTTCTTATCAGCAGCATCATTCCAAGAAACAACAAGAGTTCTTACTGATGCTGCAATTAAAGGAAAAATTGATCCTCTTGTTGGATTAAAAGAAAATGTTATAATTGGTAAGTTAATTCCAGCAGGTACAGGTATGATGAAGTATAGATCATTAAAATTAAATACTGAAAACAGTAATCAAGAGACTGAAACAATAATTGAGATTGAAGAATAA
PROTEIN sequence
Length: 236
GLAIVSEVAGTVRIEETKKKRTVYVVTDSGEEYSYDIPFGSRLKVKDGIAIGAGDEITEGSVNPHDIMSIKGVDGAREYLLSEVQKVYRLQGVDINDKHLEVVVRQMTRKIKVTEQGDTNLLPGVMIDMFDFRAENERVESFGGEKAQGDIVLLGITKAALATDSFLSAASFQETTRVLTDAAIKGKIDPLVGLKENVIIGKLIPAGTGMMKYRSLKLNTENSNQETETIIEIEE*