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NECEvent2014_2_1_scaffold_1859_2

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: 845..1417

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma factor n=1 Tax=Clostridium perfringens D str. JGS1721 RepID=B1V208_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 98.4
  • Coverage: 191.0
  • Bit_score: 377
  • Evalue 7.30e-102
  • rbh
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 191.0
  • Bit_score: 377
  • Evalue 2.70e-102
Putative RNA polymerase sigma factor {ECO:0000313|EMBL:EDT72120.1}; TaxID=488537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringen similarity UNIPROT
DB: UniProtKB
  • Identity: 98.4
  • Coverage: 191.0
  • Bit_score: 377
  • Evalue 1.00e-101

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 573
ATGGCAGAAAAGAAGCAAAGATTTATTAATAAGACTGCTAGGGAACTTAGACTTTTAGGGGAAAAGGGAAATAAGGAAGCTTTAAATGAGTTAATTATTAGGGGTAAAAAGGGTGATAAGTGTGCTATGGCTGAGGTTGTTTCTATTTATGAAGGGTTAATTCATAAATACTCTACTAGGTTTTTTATTAATGGTTATGATGTTGATGATTTAAAGCAAATAGCTAGAAGTGTTATTATTGAATCCATAAGTAAATTTGATGGAGATCATGGTTCTGAGTTTATATTTTTTATTAGTACAAATGTTAAGAACAAACTTGGAACTATGTGTAAGAAGAAGGAGAATAGACTTGATTTTTCAAGTTTAGATAGTCCTATAGGGGAAGGTATTACTATTGGTGAGACCATTAAGGATGAGATGTCCATAGAGGATGAATATGTTGAGAGAGAAAAAATGAGAGCTTTCGTAAAAGCTTTAGCTAATATTTCAAAAAGCGATAGGGAATTTATACTTTATGTATACAAAGATAGAGGAAACTTTCAGAAATATTGCCAAGAGAATAAGCATATTACT
PROTEIN sequence
Length: 191
MAEKKQRFINKTARELRLLGEKGNKEALNELIIRGKKGDKCAMAEVVSIYEGLIHKYSTRFFINGYDVDDLKQIARSVIIESISKFDGDHGSEFIFFISTNVKNKLGTMCKKKENRLDFSSLDSPIGEGITIGETIKDEMSIEDEYVEREKMRAFVKALANISKSDREFILYVYKDRGNFQKYCQENKHIT