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NECEvent2014_2_1_scaffold_2136_4

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: 820..1296

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=10 Tax=Clostridium perfringens RepID=RL6_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 307
  • Evalue 5.90e-81
  • rbh
rplF; 50S ribosomal protein L6 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 307
  • Evalue 1.70e-81
50S ribosomal protein L6 {ECO:0000255|HAMAP-Rule:MF_01365}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strai similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 159.0
  • Bit_score: 307
  • Evalue 8.30e-81

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 477
ATGTCAAGAGTAGGTAAAATGCCTATAGCTATCCCTGCTGGAGTAACTGTTACTGTAACACCAGAGAACGTTGTTACAGTAAAAGGCCCTAAGGGTGAGTTAGTTAAAGCTATGCACAAAGACATTAATATAGCTGTAGAAGATGCTCAAGTAGTTGTTACTAGACCAAGTGACGTTAAAGAACACAGAGCACTTCACGGATTAACTAGAGCTTTACTTAACAACATGGTTGTTGGAGTAAGCCAAGGTTTTTCAAAAACTTTAGAGTTAAACGGAGTTGGATACAGAGCTCAATTACAAGGAAAGAAACTTGTTATGAACTTAGGATATTCACATCCAGTAGAAGTTGAAGCAGTTGATGGAGTAGACTTCAAATTAGACGGAACAACTAAAGTTATCGTTGAAGGTATCGATAAAGAAAAAGTTGGAGCAGTTGCTGCTAACATCAGATCATGGAGAAAACCTGAACCATACAAA
PROTEIN sequence
Length: 159
MSRVGKMPIAIPAGVTVTVTPENVVTVKGPKGELVKAMHKDINIAVEDAQVVVTRPSDVKEHRALHGLTRALLNNMVVGVSQGFSKTLELNGVGYRAQLQGKKLVMNLGYSHPVEVEAVDGVDFKLDGTTKVIVEGIDKEKVGAVAANIRSWRKPEPYK