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NECEvent2014_2_1_scaffold_2242_1

Organism: NECEvent2014_2_1_Clostridium_perfringens_29_4_partial

partial RP 33 / 55 MC: 2 BSCG 24 / 51 ASCG 9 / 38 MC: 2
Location: comp(2..685)

Top 3 Functional Annotations

Value Algorithm Source
PDZ domain protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BHV4_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 446
  • Evalue 1.20e-122
  • rbh
PDZ domain protein {ECO:0000313|EMBL:EDS80633.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 228.0
  • Bit_score: 446
  • Evalue 1.60e-122
PDZ domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 228.0
  • Bit_score: 445
  • Evalue 9.60e-123

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 684
ATGGGGAATTTTTTTAAGAACTCTAAAAAGGGGAAGGATCTCCATGGAGTAAATGAAAAAAACTATGACAATATAGTTATTAAAAAGGATAAAAAAAGGTTTTGGATAAAGAGCTTATTAAAGTTAGTTAGTTTTGTTATTCTAGTTGTTTTAGTGAGTTTTATTGCCTTTAAACACTATACTAAAGATTTAACCATGAAAGAGCAAAAAGCAAATCTTTTAAATGAAATAAAAGATGGTAGATATGATATAACTAATTTAGTAAATAAATCAGGATGTAGTTTAGTTACAATCGGTGATGATAGTAATAACTTAGCTATAGGAAAAGATGATGGTAAAAATGTTACTGGATCTATCATAAGAACAGATGGATACATAATAACTAGTTATAGTGCAATAAAGGATTTTTCAAAAGTCTATGTAAAAATATCAAGTAATGATATAAGTCCTTTTGAGGCTAGAATTGTTGGATTTGATAAGGATACTGACATTGCAGTATTAAAAATAGGGGCTAATGGATTAAAAAGTATTTCAACATCAGAATTAGAGGTTCTAGAAATAGGCGAAAAAGTTGCAACCTTGGGAAATACAACAAGTGAGGAACCTGTAGGTTTTGTATCTAATGGAATAGTTAGTGCGCCTATAAAGAAAACAAGCGTAGGAGAAGAAGGTCATTCTGATTCT
PROTEIN sequence
Length: 228
MGNFFKNSKKGKDLHGVNEKNYDNIVIKKDKKRFWIKSLLKLVSFVILVVLVSFIAFKHYTKDLTMKEQKANLLNEIKDGRYDITNLVNKSGCSLVTIGDDSNNLAIGKDDGKNVTGSIIRTDGYIITSYSAIKDFSKVYVKISSNDISPFEARIVGFDKDTDIAVLKIGANGLKSISTSELEVLEIGEKVATLGNTTSEEPVGFVSNGIVSAPIKKTSVGEEGHSDS