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NECEvent2014_2_2_scaffold_4_2

Organism: NECEvent2014_2_2_Anaerococcus_prevotii_31_93

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(1710..2477)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma-F factor n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GW27_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 255.0
  • Bit_score: 500
  • Evalue 1.00e-138
  • rbh
Putative RNA polymerase sigma-F factor {ECO:0000313|EMBL:EGC81925.1}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prev similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 255.0
  • Bit_score: 500
  • Evalue 1.40e-138
FliA/WhiG subfamily RNA polymerase sigma-28 subunit similarity KEGG
DB: KEGG
  • Identity: 94.5
  • Coverage: 255.0
  • Bit_score: 481
  • Evalue 1.40e-133

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Taxonomy

Anaerococcus prevotii → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 768
ATGTCTAAGGAAAGCAAACAAGAGCAAAAAGAGGCAATCCAAGAAAAATTTGAAGAGTATTATAAGACTCGAGATAAAAAACTAAGAGATGAGCTCATAGAAGAGCATATGTATATAGTTGATATTCTCTCAAACAAATACGTAGGCAAGGGCATCGAAAAAGATGACCTCTACCAAGTAGCAAGTCTTGGACTTATCTATGCTATAGATAGATTTGATCCAACCAAAGGATACGCTTTCTCCTCTTTTGCAACCCCAACAATCATGGGGGAACTCAAAAGATATTTTAGGGATAAGGGCTGGGTTATAAGAGTACCAAGAAGAATTCAAAACTTGTACAAAAAAATAAATACAGCCAAGAAAATCCTTCCTCAGGAGCTGCAGAGAACACCGACAGTTGCAGATATTGCTGATTATCTGGGAGAAGATGAGGAAACAATCCTTGAAACAATGGAAGCAAGCAAGGTATACGCACCTCAATCTCTTGATATGAAATATCAAGTCCAAAAGGGAGAAAACGCAATAGACCTTTCTGAAATGATAGGTGAAGAGGATAAGAATTTCGATTCTATTGAGTTAAAAGACTTGATAGATAAGTCAAAAGAGAGACTAAACGACCTTGAAAAAGAAATTCTAGAATTAAGGTACTACGAAGGTAGAACCCAAGTAGATATAGCCAATACCTTGGATATAAGCCAAATGACAGTATCAAGAATTGAAAAGAAAATAATTCAAAAGTTCACCCTAGAACTTGAAAAGATGAAATAG
PROTEIN sequence
Length: 256
MSKESKQEQKEAIQEKFEEYYKTRDKKLRDELIEEHMYIVDILSNKYVGKGIEKDDLYQVASLGLIYAIDRFDPTKGYAFSSFATPTIMGELKRYFRDKGWVIRVPRRIQNLYKKINTAKKILPQELQRTPTVADIADYLGEDEETILETMEASKVYAPQSLDMKYQVQKGENAIDLSEMIGEEDKNFDSIELKDLIDKSKERLNDLEKEILELRYYEGRTQVDIANTLDISQMTVSRIEKKIIQKFTLELEKMK*