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NECEvent2014_2_2_scaffold_4_87

Organism: NECEvent2014_2_2_Anaerococcus_prevotii_31_93

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 87816..88835

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Anaerococcus prevotii ACS-065-V-Col13 RepID=F0GVB4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 339.0
  • Bit_score: 662
  • Evalue 2.60e-187
  • rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=879305 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus prevotii ACS- similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 339.0
  • Bit_score: 662
  • Evalue 3.70e-187
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 339.0
  • Bit_score: 604
  • Evalue 2.40e-170

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Taxonomy

Anaerococcus prevotii → Anaerococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1020
ATGGATAAAATAAATTTAAAAGATAAACAAACCCTAGAGAAGTTAAAAGAATATCTAAACTCAGAGGACTTGAGTGAAGAGGAAATCTATACAATTCTTGAGGGACTATCGCAAGAAGAAAAAGATGAAATAATTGATATCATAACTGACGATGAGGAAGATGAAGAAGACGATGACGAATTTATTGGTAGAAATAAAAGTGGAGTCAACACATCTATAACCCCAATTAAACGCAAGGATATGATGAAATTATCAGATCTAACCAATGAACAAATAGTAGAACAATTTCAAATAGGCAATCAAAACGCCCTTGCAGCTCTTGTAGAAAAAAACCAAGGGCTAGTTAGGTCTAGAGCCTCATATTTCTTTAGATCTCATGGTAATGACCTTGATCTTGAAGATTTGGTTCAATCTGGCATGCTTGGAATGATTCGTGCAGCTGAAAAGTTCGACCTATCCTTAGGATATAAATTTACAACCTATGCCTACAAGTGGATAGATAAGGCCATAAGAAAGGCAATAAATAAGGAAGGTCATACTATAAGAATACCTGCGGGAAAATATTTGAAATTAAATAAATTAAAACAAATTCTAAAGGCTAATCCTGAAGCAAGTGATGAAGAACTTTATAGGATTTTGGAAAATGAAGGAATCGATAAAAAACAAGCTGACGATCTTTTCCTAATTAATAGAAACCAAGTAAACTCAACATCCTTAAACATCAACCTAGACAGTGAGGATTCGACAGGTGATGAGCTAATGGATATGGTAGGAGATGAATCAACTCCAGTTGATATGCTTATTCTTGAAAAAGATATGGAAAACTTCCTATTAAAAGCCTTAGACCAACTAACCGATAGAGAAAAGCAAATAATAATATACAGGTATGGTTTGGATAACGAAAAACCAAAAACCTTGGAAGAAATCGGCAAAATTTATGATTTATCTAGAGAGAGAATTAGGCAAATAGAAAATCAAGCCCTAGGCAAACTAAAAGAATTCTCAGAAAGAGAAGAGTAA
PROTEIN sequence
Length: 340
MDKINLKDKQTLEKLKEYLNSEDLSEEEIYTILEGLSQEEKDEIIDIITDDEEDEEDDDEFIGRNKSGVNTSITPIKRKDMMKLSDLTNEQIVEQFQIGNQNALAALVEKNQGLVRSRASYFFRSHGNDLDLEDLVQSGMLGMIRAAEKFDLSLGYKFTTYAYKWIDKAIRKAINKEGHTIRIPAGKYLKLNKLKQILKANPEASDEELYRILENEGIDKKQADDLFLINRNQVNSTSLNINLDSEDSTGDELMDMVGDESTPVDMLILEKDMENFLLKALDQLTDREKQIIIYRYGLDNEKPKTLEEIGKIYDLSRERIRQIENQALGKLKEFSEREE*