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NECEvent2014_2_2_scaffold_2036_1

Organism: NECEvent2014_2_2_Peptoclostridium_difficile_30_3_partial

partial RP 9 / 55 BSCG 5 / 51 ASCG 2 / 38
Location: comp(3..236)

Top 3 Functional Annotations

Value Algorithm Source
rluA; Ribosomal small subunit pseudouridine synthaseA (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 160
  • Evalue 2.80e-37
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pep similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 160
  • Evalue 1.40e-36
Pseudouridine synthase n=135 Tax=Clostridium difficile RepID=G6BR09_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 78.0
  • Bit_score: 160
  • Evalue 9.80e-37

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 234
ATGGCTAAAAAGCAACGTATAGATAAAATTCTTTCAAATTTAGGTTATGGAAGTAGAAGTGAAATAAAGAAGTATTGTAAACAAGGGTCTGTAGTAGTAAATGGAAGTGAAGTTTCAAATCCAGGAACTCAAGTAGACACTGAAAATGATGAGATATTATTTAATGGAGAAGAAGTTATATATAGAGAATATATATATTTGATGATGAATAAACCTGATGGATATATATCAGCA
PROTEIN sequence
Length: 78
MAKKQRIDKILSNLGYGSRSEIKKYCKQGSVVVNGSEVSNPGTQVDTENDEILFNGEEVIYREYIYLMMNKPDGYISA