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NECEvent2014_2_2_scaffold_2466_1

Organism: NECEvent2014_2_2_Peptoclostridium_difficile_30_3_partial

partial RP 9 / 55 BSCG 5 / 51 ASCG 2 / 38
Location: 66..1076

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=Clostridium difficile CD34 RepID=T2W3G4_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 337.0
  • Bit_score: 654
  • Evalue 4.20e-185
  • rbh
Transcription antiterminator, PTS operonregulator similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 337.0
  • Bit_score: 654
  • Evalue 1.20e-185
Transcription antiterminator {ECO:0000313|EMBL:CKH92784.1}; Transcription antiterminator, PTS operonregulator {ECO:0000313|EMBL:CEJ96542.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 337.0
  • Bit_score: 654
  • Evalue 5.90e-185

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1011
ATGAGGCAAAGAATAAAAAACTTAATTGAAAATGAAGATAAGAAAAATCCTTTAACAGATGAAGCGATTTCAAGTAGGTTAAATATTCGAAGAGAAGATGTTACCTTTTTGAGAAATGAGTTAAAAATAGAAGATTCAAGACAAAGAAGAAAAGTTGTTTTAATTAAAGCTATAAAAGATATTTTAAAAGAAGAAAAAACTATAAATAAAAATGATATAACAAGAAGATTAAACAGCATTGGGTTTACAGTATCAAGATTTACAGTCATACAATACTTAAAAGAGATTCAAGATTCTGGTGACCTAAAACTTGATAAAGAGAGTGATGATAAAAAAGAAAAAATAATCAATAATAGAGAAAATAAAGATATAGCATTTGATAAACTTATAGGTAGTAGTGGTAGCTTAAGTACAATTATAAAACTAGCCAAAGCAGCAATTCTTTATCCACCTCATGGTCTTCATACTATTATTATGGGGCCAACTGGTGTTGGAAAGAGTGAGTTAGCAGAGTGTATGTATAAATTTGCAGTAGAATCATCCAGATTCCCTAAGAATGCACCATTTATAGTTTTTAATGCAGCAGATTATTCAGAGAATCCACAGCTTTTGCTATCACAGTTATTTGGACACGTTAAAGGTGCTTTTACAGGAGCTGATGAGAACAAAGAAGGATTAGTATCAAAGGCAGATGGAGGAATATTGTTTATAGATGAAATACATAGATTACCTCATGAAGGTCAAGAAATACTATTTCAACTGATTGATAAAGGTATGGTCAGAAAGTTAGGAGAAACAAGACTAACACATAAAATAGATGTAATGATTATTTCAGCAACTTCTGAGCCAATAGATTCTCATTTACTTAATACATTTAAAAGACGTATACCTGTAACAATTGAAATAGCAGAATTAGTTGCAAGACCATTAAATGAGAGGTTTGACATTATAAATAATTTCTTCTTAATAGAAGCTCAAAGAATGGGAGCAAACATACATATAAAGTCAGAT
PROTEIN sequence
Length: 337
MRQRIKNLIENEDKKNPLTDEAISSRLNIRREDVTFLRNELKIEDSRQRRKVVLIKAIKDILKEEKTINKNDITRRLNSIGFTVSRFTVIQYLKEIQDSGDLKLDKESDDKKEKIINNRENKDIAFDKLIGSSGSLSTIIKLAKAAILYPPHGLHTIIMGPTGVGKSELAECMYKFAVESSRFPKNAPFIVFNAADYSENPQLLLSQLFGHVKGAFTGADENKEGLVSKADGGILFIDEIHRLPHEGQEILFQLIDKGMVRKLGETRLTHKIDVMIISATSEPIDSHLLNTFKRRIPVTIEIAELVARPLNERFDIINNFFLIEAQRMGANIHIKSD