ggKbase home page

NECEvent2014_2_2_scaffold_2501_1

Organism: NECEvent2014_2_2_Peptoclostridium_difficile_30_3_partial

partial RP 9 / 55 BSCG 5 / 51 ASCG 2 / 38
Location: comp(2..868)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RecD-like DNA helicase {ECO:0000256|HAMAP-Rule:MF_01488}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01488};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 577
  • Evalue 1.30e-161
Viral (Super1) RNA helicase family protein n=1 Tax=Clostridium difficile DA00211 RepID=T3UZM8_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 577
  • Evalue 9.50e-162
DNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 289.0
  • Bit_score: 577
  • Evalue 2.70e-162

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 867
ATGGAAAAATTAGAAGGAATGATAAGTGAAATAGTCTTTAAAAACGAAGATAATGGTTATACAATAGCTCACCTGGTAAATGAAAATGATGAAATTGTGGTTGTAGGATGTATGCCTACTTTGGCAATTGGAGAAAGCATAGAAGTTGAAGGAAAGTGGGTAAATCATAAGATTTATGGGACTCAATTTGAAGTGAATAGTTTTATGCCAGTAACACCATCATCCTTAGAAGGAATTTATGTTTACTTATCTTCTGGAATGATACATGGTATTGGTGAAAAAATGGCAAAAAGAATAATTGATAAGTTTGGTGTAGATACGTTAGAGGTGATACAAAATTCACCAGAAAAACTACAAGAAGTAGAAGGTATAGGGAGTAAAAAAGTAAAACAAATAGTAAAAAGTTATGAAGAAGACAGAGAATTGAGAAATATAATAATACAGCTATCTCCTTTTGGAATAACACCAAATTACTGCCTAAAAATATATAAAAAATATAAAAGCAGTGCAATAGAAGTTATAAATAAAAACCCATACCAACTTGCTGAAGATATAAGAGGAATTGGATTTAAAGTAGCTGATAGTATAGCAAGTAAAATTGGTATAGATAAAAACTCTAAAGATAGAATTTGTCAGGGAATCTTATACACTTTAAATAAATCTTTAAGTAATGGGCATACATATTTACCAGAGCATGTTCTAATACAAGATTCGGAAAAATTATTGGAGCTAAATGGAGAAATAATAAAAGAGTGTGTAATGATGCTAGTTTATAATCAAAAAATACATATAGAGAAAGTAAACAATGAAAATCTTATATACCTTATGCCATACTATTTAGCTGAAAATGGAGTATGTAGTCAAATA
PROTEIN sequence
Length: 289
MEKLEGMISEIVFKNEDNGYTIAHLVNENDEIVVVGCMPTLAIGESIEVEGKWVNHKIYGTQFEVNSFMPVTPSSLEGIYVYLSSGMIHGIGEKMAKRIIDKFGVDTLEVIQNSPEKLQEVEGIGSKKVKQIVKSYEEDRELRNIIIQLSPFGITPNYCLKIYKKYKSSAIEVINKNPYQLAEDIRGIGFKVADSIASKIGIDKNSKDRICQGILYTLNKSLSNGHTYLPEHVLIQDSEKLLELNGEIIKECVMMLVYNQKIHIEKVNNENLIYLMPYYLAENGVCSQI