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NECEvent2014_2_3_scaffold_296

Alias: 172_003_scaffold_296

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_296_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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216..1580
DNA (1365bp) protein (455aa)
Amino acid permease family protein n=2 Tax=Clostridium difficile RepID=T3KC63_CLODI rbh
putative amino acid permease
Amino acid permease {ECO:0000313|EMBL:EHJ32757.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile
NECEvent2014_2_3_scaffold_296_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1954..2652
DNA (699bp) protein (233aa)
mtnN; MTA/SAH nucleosidase (EC:3.2.2.9 3.2.2.16)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {E
MTA/SAH nucleosidase n=185 Tax=Clostridium difficile RepID=T3GGY4_CLODC rbh
NECEvent2014_2_3_scaffold_296_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2675..3676
DNA (1002bp) protein (334aa)
trpS; tryptophanyl-tRNA ligase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase (Tryptophan--tRNA ligase) (TrpRS) {ECO:0000313|EMBL:CAJ69496.1}; EC=6.1.1.2 {ECO:0000313|EMBL:CAJ69496.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostri
Tryptophan--tRNA ligase n=88 Tax=Clostridium difficile RepID=T3GCG8_CLODC rbh
NECEvent2014_2_3_scaffold_296_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4583..4867)
DNA (285bp) protein (95aa)
Uncharacterized protein n=145 Tax=Clostridium difficile RepID=G6BZS7_CLODI
ADP-ribosyltransferase binding component domain protein {ECO:0000313|EMBL:EQE60611.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;
protective antigen
NECEvent2014_2_3_scaffold_296_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4921..5271)
DNA (351bp) protein (117aa)
Uncharacterized protein n=149 Tax=Clostridium difficile RepID=G6BZS6_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL22964.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
protective antigen
NECEvent2014_2_3_scaffold_296_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5560..5751)
DNA (192bp) protein (64aa)
Uncharacterized protein n=159 Tax=Clostridium difficile RepID=G6BZS4_CLODI
Protective antigen {ECO:0000313|EMBL:CKH38496.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Cl
protective antigen
NECEvent2014_2_3_scaffold_296_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5870..6013)
DNA (144bp) protein (48aa)
Uncharacterized protein n=158 Tax=Clostridium difficile RepID=G6BZS3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL22962.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
ADP-ribosyltransferase subunit CdtA
NECEvent2014_2_3_scaffold_296_8
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6520..9564
DNA (3045bp) protein (1015aa)
LPXTG cell wall anchor domain protein n=33 Tax=Clostridium difficile RepID=T3CKH0_CLODI rbh
LPXTG-domain-containing protein cell wall anchor domain {ECO:0000313|EMBL:EOI44360.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="E
hypothetical protein
NECEvent2014_2_3_scaffold_296_9
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9800..10126
DNA (327bp) protein (109aa)
Uncharacterized protein n=9 Tax=Firmicutes RepID=R2UF65_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOI44361.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0313.;"
conjugative transposon protein
NECEvent2014_2_3_scaffold_296_10
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10141..10524
DNA (384bp) protein (128aa)
Conjugative transposon protein n=20 Tax=Firmicutes RepID=R2X2M3_ENTFC
Conjugative transposon protein {ECO:0000313|EMBL:EOI44362.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen
putative conjugative transposon protein DUF961family Tn916-like, CTn1-Orf29
NECEvent2014_2_3_scaffold_296_11
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10622..11107
DNA (486bp) protein (162aa)
Uncharacterized protein n=32 Tax=Firmicutes RepID=R2WPB7_ENTFC rbh
Uncharacterized protein {ECO:0000313|EMBL:EOI44363.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0313.;"
hypothetical protein
NECEvent2014_2_3_scaffold_296_12
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11224..12618
DNA (1395bp) protein (465aa)
FtsK/SpoIIIE family cell division protein n=8 Tax=Firmicutes RepID=R2WP85_ENTFC rbh
FtsK/SpoIIIE family cell division protein {ECO:0000313|EMBL:EOI44364.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus fa
conjugative transposon FtsK/SpoIIIE-like protein
NECEvent2014_2_3_scaffold_296_13
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12898..14019
DNA (1122bp) protein (374aa)
Replication initiation factor family protein n=5 Tax=Firmicutes RepID=T3IJT5_CLODC rbh
Phage replication initiation protein {ECO:0000313|EMBL:EOI44365.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium
putative replication initiation factorTn916-like, CTn1-Orf26
NECEvent2014_2_3_scaffold_296_14
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14027..14161
DNA (135bp) protein (45aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=T3IEP8_CLODC
Uncharacterized protein {ECO:0000313|EMBL:EOI44366.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0313.;"
hypothetical protein
NECEvent2014_2_3_scaffold_296_15
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14162..14383
DNA (222bp) protein (74aa)
Conjugative transposon protein n=5 Tax=Clostridiales RepID=E5VPG3_9FIRM
conjugative transposon protein
Uncharacterized protein {ECO:0000313|EMBL:CBL42877.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
NECEvent2014_2_3_scaffold_296_16
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14589..15230
DNA (642bp) protein (214aa)
Chloramphenicol acetyltransferase family protein n=6 Tax=Firmicutes RepID=T3IG24_CLODC rbh
Uncharacterized protein {ECO:0000313|EMBL:EOI44369.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0313.;"
chloramphenicol o-acetyltransferase
NECEvent2014_2_3_scaffold_296_17
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15313..15609
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0313 RepID=R2UF36_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:EOI44370.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0313.;"
putative conjugative transposon proteinTn916-like, CTn7-Orf23
NECEvent2014_2_3_scaffold_296_18
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15549..16031
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium EnGen0313 RepID=R2UF75_ENTFC rbh
Uncharacterized protein {ECO:0000313|EMBL:EOI44371.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0313.;"
Antirestriction protein (ArdA).
NECEvent2014_2_3_scaffold_296_19
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16049..16552
DNA (504bp) protein (168aa)
Antirestriction family protein n=3 Tax=Firmicutes RepID=T3IL09_CLODC rbh
Uncharacterized protein {ECO:0000313|EMBL:EOI44372.1}; TaxID=1158636 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium EnGen0313.;"
Antirestriction protein
Displaying 19 items

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