ggKbase home page

NECEvent2014_2_3_scaffold_640_3

Organism: NECEvent2014_2_3_UNK

partial RP 8 / 55 BSCG 3 / 51 ASCG 2 / 38 MC: 1
Location: comp(720..1004)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. SS2/1 RepID=B0P253_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 96.8
  • Coverage: 94.0
  • Bit_score: 176
  • Evalue 9.40e-42
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:EDS21379.1}; TaxID=411484 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. SS2/1. similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 94.0
  • Bit_score: 175
  • Evalue 2.90e-41
Predicted transcriptional regulators similarity KEGG
DB: KEGG
  • Identity: 81.8
  • Coverage: 77.0
  • Bit_score: 120
  • Evalue 2.90e-25

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. SS2/1 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 285
TTGACATTCTTTACTTGCAGGAGTATCATAAGATTAGAAAAGGAAAGCAAACTTTCCATTTGTTCAAGAAAGGGGTATGTTGTGAAAAATCGTTTAGAAGAATTACGAAAACAAAGAGGTATTAAACAAGAAGATTTAGCGACTGCTCTTGAAGTATCTCGTCAAACAATAGGCTCTTTAGAAAATGGACGCTACAATCCCTCTATTATCTTAGCTTTTAAAATTGCAAGGTACTTTCAAATGAGTATTGAAGAAATATTTATTTATGAGGAGGAAAGCAAATGA
PROTEIN sequence
Length: 95
LTFFTCRSIIRLEKESKLSICSRKGYVVKNRLEELRKQRGIKQEDLATALEVSRQTIGSLENGRYNPSIILAFKIARYFQMSIEEIFIYEEESK*