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NECEvent2014_2_3_scaffold_2239_1

Organism: NECEvent2014_2_3_UNK

partial RP 8 / 55 BSCG 3 / 51 ASCG 2 / 38 MC: 1
Location: 1..1125

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1344987 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 374.0
  • Bit_score: 733
  • Evalue 1.40e-208
Transcription-repair-coupling factor n=1 Tax=Staphylococcus epidermidis VCU071 RepID=H0DL31_STAEP similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 374.0
  • Bit_score: 734
  • Evalue 4.60e-209
mfd; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 374.0
  • Bit_score: 734
  • Evalue 1.30e-209

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Taxonomy

Staphylococcus epidermidis → Staphylococcus → Bacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1125
GAAACACCACCTGAAAATCGTTTTCCTGTACAAACTTATGTCTTAGAGCAGAATACGAACTTTATTAAAGAGGCATTAGAGCGTGAATTATCTCGCGATGGACAAGTATTTTATTTGTATAACAAAGTGCAGTCCATTTATGAAAAAAGAGAACAACTTCAAATGTTAATGCCTGACGCTAACATTGCTGTAGCACATGGCCAAATGACTGAACGCGATTTAGAGGAAACGATGTTAAGCTTTATTAATCATGAGTACGATATTTTAGTAACGACAACAATTATTGAAACAGGTGTAGACGTACCAAATGCTAATACGTTAATCATAGAAGAGGCCGATCGTTTTGGATTAAGCCAGCTATACCAATTAAGAGGACGTGTAGGACGTTCAAGTAGAATTGGTTACGCTTATTTCTTACATCCAGCTAACAAAGTGTTAAATGAGACTGCTGAAGAGCGATTGCAAGCTATTAAGGAGTTTACCGAACTAGGTTCAGGTTTTAAAATCGCTATGCGAGATTTAAATATTCGTGGTGCAGGCAATTTACTCGGTAAGCAACAACATGGCTTTATTGATTCGGTTGGTTTCGATTTATACTCTCAAATGTTAGAAGAAGCTGTAAACGAAAAACGTGGAATTAAAGAAGAATCGCCGGATGCACCAGATATTGAAGTTGAATTGCATTTAGATGCTTATTTACCAGCTGAATATATACAAAGTGAACAGGCTAAAATTGAGATATACAAAAAACTTCGAAAAGTAGAAACAGAAGAACAACTTTTCGATGTCAAAGATGAATTAATAGATCGTTTTAATGATTATCCAATTGAAGTCGAACGATTATTAGATATTGTTGAAATCAAAGTCCACGCTCTACATGCGGGTGTCGAATTGATAAAAGACAAAGGAAAATCTATACAAATCATTTTATCACCTAAAGCGACTGAAGATATTAATGGAGAAGAATTGTTTAAACAGACGCAACCTCTTGGTAGAGCAATGAAAGTTGGCGTGCAAAATAATGCAATGAATGTAACGCTAACAAAATCAAAACAATGGTTAGATAGTTTGAAATTCTTAGTTAGATGTATTGAAGAAAGTATGGCGATTAAAGATGAAGACTAA
PROTEIN sequence
Length: 375
ETPPENRFPVQTYVLEQNTNFIKEALERELSRDGQVFYLYNKVQSIYEKREQLQMLMPDANIAVAHGQMTERDLEETMLSFINHEYDILVTTTIIETGVDVPNANTLIIEEADRFGLSQLYQLRGRVGRSSRIGYAYFLHPANKVLNETAEERLQAIKEFTELGSGFKIAMRDLNIRGAGNLLGKQQHGFIDSVGFDLYSQMLEEAVNEKRGIKEESPDAPDIEVELHLDAYLPAEYIQSEQAKIEIYKKLRKVETEEQLFDVKDELIDRFNDYPIEVERLLDIVEIKVHALHAGVELIKDKGKSIQIILSPKATEDINGEELFKQTQPLGRAMKVGVQNNAMNVTLTKSKQWLDSLKFLVRCIEESMAIKDED*