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NECEvent2014_2_3_scaffold_280_10

Organism: NECEvent2014_2_3_Actinomyces_HPA0247_66_505

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: comp(10658..11503)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, permease protein n=1 Tax=Atopobium sp. ICM58 RepID=J3J868_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 97.9
  • Coverage: 281.0
  • Bit_score: 539
  • Evalue 1.60e-150
  • rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EJN52847.1}; TaxID=1105030 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Atopobium.;" source="Atopobium sp. ICM similarity UNIPROT
DB: UniProtKB
  • Identity: 97.9
  • Coverage: 281.0
  • Bit_score: 539
  • Evalue 2.30e-150
sugar ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 269.0
  • Bit_score: 312
  • Evalue 1.20e-82

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Taxonomy

Atopobium sp. ICM58 → Atopobium → Coriobacteriales → Coriobacteriia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 846
ATGAGCTCGTCTAAGTCGCACTCGCGTCGTCCCTGGTGGTCGACCCTGGGGATCTACGTAGGGCTGTCGCTGGCTGCTTTCATCATGGTGGTCCCGCTGCTCTTTAGCTTCGTCACGGCCTTCAAGTCTCCGCAGGACTTCGCCTCGCACTCACCTTTCGCGCTGCCCTCGCCGCCCTCCCTGGCCTCGTTCCAGGCGATCCTGACGGGCCGAGTGAACTTCGGCGACGCGATCATCACGACCCTTCTCGTCGTGGTGGTGATGGTCGTGGGGCAGCTGGTGTCCTCCGTCCTGGCCGCCTACGCGTTCGCGCGCATCGAGTTCCCGGGACGCGAGGTGATCTTCTGGCTCTTCTTGGGCACCATGATGATCCCGGCGTCGGTCCTCGTTATCCCGCTGTACCTCATGATGGCGAAGATGGGGCTCAACAACACCTTCTGGGGCATCGTGTTGCCCTTCGTGTTCGCCTCGCCCTACGCGGTGTTCTTGCTGCGTCAGTCGTTCCGTCAGATCCCCCAGGAGATCATTGATGCGGCGACGATGGACGGCGCTGGCCAGGTGCGTATCCTCTTCTCCATCGTCGTTCCCATCTCGAAGCCGATCATTGCGACGCTCGTGCTCATCACGGTTGTGAGCCAGTGGAACTCGTTCCTGTGGCCGCGGATCATCGCCGCGACCAGGCCTCGCGTCCTCACGGTCGCCACGGCCGCCCTGCAGAGCCAGTACAACGCGAATTGGACGTACGTCATGGCGGCGACGACCATTGCGCTCGTGCCCCTGATCGCTCTGTTCATTGTCTTTCAACGACACATCGTTGAATCTATTGCCTTGACGGGCATCAAGTAA
PROTEIN sequence
Length: 282
MSSSKSHSRRPWWSTLGIYVGLSLAAFIMVVPLLFSFVTAFKSPQDFASHSPFALPSPPSLASFQAILTGRVNFGDAIITTLLVVVVMVVGQLVSSVLAAYAFARIEFPGREVIFWLFLGTMMIPASVLVIPLYLMMAKMGLNNTFWGIVLPFVFASPYAVFLLRQSFRQIPQEIIDAATMDGAGQVRILFSIVVPISKPIIATLVLITVVSQWNSFLWPRIIAATRPRVLTVATAALQSQYNANWTYVMAATTIALVPLIALFIVFQRHIVESIALTGIK*