ggKbase home page

NECEvent2014_2_3_scaffold_793_5

Organism: NECEvent2014_2_3_Actinomyces_HPA0247_66_505

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 ASCG 15 / 38 MC: 1
Location: 2156..3073

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1203556 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 305.0
  • Bit_score: 617
  • Evalue 9.40e-174
RluA family pseudouridine synthase (EC:3.2.1.17) similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 302.0
  • Bit_score: 407
  • Evalue 3.90e-111
Pseudouridine synthase n=1 Tax=Actinomyces sp. HPA0247 RepID=S2Z4M4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 305.0
  • Bit_score: 619
  • Evalue 2.30e-174
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Actinomyces sp. HPA0247 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 918
GTGAGCTCACGCATGCTGCCCGTGCCCGATGCGCTGGTGGGTGAGCGGGTCGACGCCGCGCTGGCCCGCATGCTCGGGCTGTCGCGCTCGCGCTGCGCGGAGTTGGCGGGGGAGGGGCACGTTCTCATTAATGGCGTTGCTGCGGGGAAATCGGATCGCCTCGGAGCCCTCGACATCATCGAGGTGACGATCCCGGAACCCGAGAATAAGCCGACCCCGGTCACCGACATGACGATTCTGTACGACGACGAGGACATCGTCGTCGTCGATAAGCCGGTCGGTGTCGCCGCGCATACCGGACCGGGGTGGGAAGGCCCCACGGTCCTGGGCAACCTGGAGGCCGCGGGATACCGCATCACGAGCTACGGCCCTCCCGAGCGCCAGGGGATCGTTCACCGCCTCGACGTGGGCACGTCGGGTGCGATGATGGTCGCCAAGTCCGAGCTCGCTTACACGGTCATGAAGCGGGCCTTCAAGGAACGCACGATCGAGAAGGTGTACCACGCGGTCGTGGCCGGGCATCTTGACCCAGCCTCGGGCACGATCGATGCCCCGATTGGGCGTCATCCGTCGCGCGAATGGCGCATGGCTGTGATCGACGGCGGTAAGCGCGCGGTCACTCACTACGACACGCTTGAGCTCATGGCGGGCGCGCAGCTCACCGAGGTGCACCTCGAGACGGGACGTACCCACCAGATCCGCGTGCACATGGCGGCTGTCGGGCATCCGTGCGTGGGTGATACCTTCTACGGCGCCGACCCCACGCAGGCAGAGCGCTTGGGACTCACCCGTCAGTGGCTGCACGCCGTGCGCCTCGGGTTCGCGCACCCGCGCACCGGGATGCCGATGAGCGTGTCCAGCCCGTACCCGGCCGATCTCGAGGCCGCGCTTGAGGAACTGCGGCACCCCCACGACTGA
PROTEIN sequence
Length: 306
VSSRMLPVPDALVGERVDAALARMLGLSRSRCAELAGEGHVLINGVAAGKSDRLGALDIIEVTIPEPENKPTPVTDMTILYDDEDIVVVDKPVGVAAHTGPGWEGPTVLGNLEAAGYRITSYGPPERQGIVHRLDVGTSGAMMVAKSELAYTVMKRAFKERTIEKVYHAVVAGHLDPASGTIDAPIGRHPSREWRMAVIDGGKRAVTHYDTLELMAGAQLTEVHLETGRTHQIRVHMAAVGHPCVGDTFYGADPTQAERLGLTRQWLHAVRLGFAHPRTGMPMSVSSPYPADLEAALEELRHPHD*