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NECEvent2014_2_3_scaffold_240_12

Organism: NECEvent2014_2_3_Veillonella_DORA_A_3_16_22-rel_38_199

near complete RP 52 / 55 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 9879..14072

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su similarity UNIPROT
DB: UniProtKB
  • Identity: 98.7
  • Coverage: 999.99
  • Bit_score: 2726
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=3 Tax=Veillonella dispar ATCC 17748 RepID=C4FNB8_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.7
  • Coverage: 999.99
  • Bit_score: 2726
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 999.99
  • Bit_score: 2671
  • Evalue 0.0

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Taxonomy

Veillonella dispar → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 4194
ATGGTAGACCAGTGTGTTTTGATAGGGGTGAAAGCAAATATGTTCAAACCTGAACAGGTAGGCAAACGAACTCGTTATACGTACGCTAAAATTAACGAAGTTATCAAGATGCCGCATTTATTGGACATTCAGCGTAAATCGTATGAGTGGTTCTTGGAGAGTGGTTTACAAAATATTTTCAACGATATTTCTCCGATTAAAGACAATTCAGGTAATCTAGTACTTTCTTTCGAAGGTTTCAGCTTAGGTGAACCTAAGTATGATATTAATGAATGTAAAAACCGTGATGCTACTTATGCAGCACCACTTCGTGTAAATGTTCGCTTGGTAAATAATGATCCAGAAAATATGGACATTAAAGAACAAGAAGTATTCATGGGCGATTTCCCATTGATGACTGATACAGGTACTTTCATCATCAATGGTGCAGAACGTGTTATTGTATCCCAATTGGTACGTTCTCCAGGCGTTTACTACAATAAAGAAATCGATACAATGGGTAACCGTTTGTACGATTCCACAGTTATTCCTAACCGTGGCGCATGGATTGAGCTTGAAACTGATGCAAGCGAAGTTGTTGCTGTTCGTATTGACCGTAACCGTAAATTACCAGCTACTGTATTGGTACGTGCATTGGGTTGGGATACTAATGAAAGCATCCTTGACCTCTTCTGGAATGGTAAAACTGATGAAGATGGTTTACCAGTATATGATGAACGCATCGTTCGTACATTAGAAAAAGATACAACTCAATCTGCCGATGAAGCATTGGTTGAAATCTATAAAAAATTACGTCCAGGCGAGCCTCCTACTGTAGAGTCCGCTCGTAACTTGTTCGATAACTTGTTCTTCGATGCACGTCGTTATGACTTGGCGCGCGTTGGTCGTTACAAATTGAACAAAAAACTTGGCTGGCGTCAACGCATGTTGGGTCAAACATTGGCACAACCTATCGTAGATCCAGAGACTGGCGAAATTATCCTTGATGCAGGTGTACAAGTTGGGGAAGAACAACTTGATATCGTTGCTAATAGCCATGTATTCGATGGCGAAGGTTTCGCTGAATTCTACATCGTAAATAACGATGGTGTAGAGTCCAAAGTTATCTGTAATAACTGCAACTTGCCATTCAATCACCGTACAGTAACTCGCGAAGATATGATCGCTAACATCTCTTACTTGCTCAACCTTATGGATGGTGCAGGTCATACAGATGATATCGACCATTTGGGTAACCGTCGTCTTCGTTGCGTAGGTGAATTGTTGCAAAACCAATTCCGTATTGGTTTAACTCGTATGGAACGTGTTGTTCGTGAACGTATGACAATTCAAGAAATCGAATCTATCACGCCTCAAGCGTTGATTAATATTCGTCCTGTAGTGGCAGCAATCAAAGAATTCTTTGGTTCTTCCCAATTGTCTCAGTTCATGGACCAAACAAACCCATTAGCAGAATTGACTCACAAACGTCGTCTATCTGCCCTTGGCCCTGGTGGTTTATCTCGTGAGCGTGCAGGCTTCGAAGTTCGTGACGTGCATCACTCTCACTATGGCCGCATGTGTCCAATCGAAACTCCAGAAGGTCCAAACATCGGTTTGATCAACTCCTTGTCTAACTATGCGAAAGTAAATGAATTCGGTTTCATTGAAGCTCCATACCGTAAGGTTGAAAAAATCTATGGTACAGGTGAAGATGCAGACAAAGTTATCAAGGTTCGTGTAACTGATTCCGTTGTATATATGACAGCAGATGAAGAAGAAGGCATGACAATTGCCCAAGCGAACTCTCCAATCGATGCTGAAGGTTACTTTACTAATGAACACGTAGCTTGTCGTCGTGGTCATGATGTATTAGAAGTTACACCTGATAAGGTTGACTACATGGACGTTAGTCCAAAAGAAGTTGTATCCATTGGTACAGCTATGATTCCATTCCTTGAAAATGACGATGCTAACCGTGCCTTGATGGGTGCGAACATGCAACGTCAAGCGGTACCACTCTTGCGTGCGCAAGCTCCACTTGTTGGTACAGGTATGGAATATACAGCAGCTACTGACTCCGGTGTTTGCGTACTTGCACGTGAAGCCGGTAAAGTTGTACGTTGCTGGGGTAATGAAATCCACGTTCTTCGCGATAGCGATGGTCGTGTAGATACATACCGTATGAATAAATTCCTTCGTTCTAACCAATCCACATGCTTTAACCAAAAACCAATCGTTAATCGTGGCGATCATGTTGTAAAAGGTCAAGTGTTGGCTGACGGTCCTGCTACTGATGGCGGCGAATTGGCATTAGGGTATAACGTTCTTGTAGCGTTCATGCCTTGGGAAGGTTATAACTACGAAGATGCTATCTTGCTCAGTGAAGAACTTTGCAAAGAAGATATCTATACATCCATTCATATTGAAGAATACGAATGTGATGCGCGCGACACTAAATTAGGTGCTGAAGAAATTACTCGTGAATTGCCTAATACTGGTGACGACACTCTTAAAAACTTAGATGAAGAAGGTATTATTTGCATTGGTGCAGAAGTACACCCTGGCGATATCCTAGTAGGTAAAGCTACACCAAAAGGCGAAACTGAACTTACTCCAGAGGAACGTTTATTGCGCGCTATCTTTGGCGACAAAGAACGTGAAGTTCGCGACACATCCTTGCGCGTACCTCATGGCGAATCTGGTAAAGTAGTAGACGTTAAAGTCTTCACTCGTGAAAACGGCGACGAATTACAACCAGGTGTAAATAAACTTGTTCGCGTATACATCGCTCAAAAACGTAAGATTCATGAAGGCGATAAAATGGCGGGCCGTCATGGTAACAAAGGTGTCGTTTCTCGCGTTATGAGAAAAGAAGATATGCCATTCCTTCCAGATGGTACTCCAGTACAAATCGTATTGAACCCATTGGGCGTACCTTCTCGTATGAACATCGGTCAGGTTCTTGAAACTCACTTGGGTTGGGCTGTTCAAGGCTTAGGTATGAAAATCAAAGCTACAGACCTTCACATTCAAAATGTATTGAAAGAAGCTCGTACTGATGCATCTTATTGGGAACAAATTGATGCTATTCGCGGCTTATATGCTGAAATTGAAGAATTAGAAGCAAAAGCTAAAGAAGATGTGACAGTTCCTCATTTCGACATCGATGAAAAAATTATCGACTTGAAATCTCAAATTCTTGGCCATGTAGAATCTGCAGCGCAAAAGAAACTTGAAGCTCTTGGCGGCGAAGCTCGTTATCAAGAACTTAAAGCTATTGAAGCTAAATACAATGCACTTCATGTAGAATTCTTCGACTCTGAAGAAGATGCTCCAGAAATGGATCCAGCTCTTGTAGAAGAATTAGAAGCTATTAATAAAGTTAAAACTACGTTGAACCATATTGAATCTGCTCGTGCTAAACGCGTTGAAATTCGTCAAGAACTCGAAGGCCTTGGTTACGATTATGAAACATATGGCATGCCAAAACCAGATGTAGCAGGTATTCATATTGCTACACCTGTATTTGATGGTGCGCATGAAAAAGATGTATTTGAAACATTAGGCATTGCTGGTCGTTCCGATGATGGTAAAACAGTATTGTACGATGGTCGTACTGGTGAACCTATGGATAACCGTGTAACTGTTGGTTACGTATACATGCTTAAACTCCATCACTTGGTTGACGACAAAATCCATGCTCGTTCCACAGGTCCGTACTCCCTTGTTACACAACAACCATTGGGCGGTAAAGCTCAGTTCGGTGGTCAACGTTTCGGGGAAATGGAAGTTTGGGCTCTCGAAGCATATGGCGCAGCTTATACACTTCAAGAGCTATTAACTGTTAAGTCTGACGACGTTGTTGGTCGTGTGAAAGCATACGAAAAAATCGTTAAAGGCGAAAACATCCCTGAACCAGGTGTACCTGAGTCCTTCAAGGTATTGCTCAAAGAACTTCAAAGTATTGGTCTTGATGTAAAAATCTTGAATGAAGATCAAGAAGAAGTTGTTATGAAAGAACTTGATGACGAAGATGAAGTGGTAGAAACTGGCATTGAAGAAGTTATGGATGGCAGTGCAGTAGAAACTGATGAAGTAACTGTAGTAGAGCCAGAAGTAGAGGAAGAAGCACCAGCTAATAACGGCGGTGAAGACGATATCCTTAGCCAATTGGCATTCCCAATGGGCGATTCCTCTAACGATGAAGACTAA
PROTEIN sequence
Length: 1398
MVDQCVLIGVKANMFKPEQVGKRTRYTYAKINEVIKMPHLLDIQRKSYEWFLESGLQNIFNDISPIKDNSGNLVLSFEGFSLGEPKYDINECKNRDATYAAPLRVNVRLVNNDPENMDIKEQEVFMGDFPLMTDTGTFIINGAERVIVSQLVRSPGVYYNKEIDTMGNRLYDSTVIPNRGAWIELETDASEVVAVRIDRNRKLPATVLVRALGWDTNESILDLFWNGKTDEDGLPVYDERIVRTLEKDTTQSADEALVEIYKKLRPGEPPTVESARNLFDNLFFDARRYDLARVGRYKLNKKLGWRQRMLGQTLAQPIVDPETGEIILDAGVQVGEEQLDIVANSHVFDGEGFAEFYIVNNDGVESKVICNNCNLPFNHRTVTREDMIANISYLLNLMDGAGHTDDIDHLGNRRLRCVGELLQNQFRIGLTRMERVVRERMTIQEIESITPQALINIRPVVAAIKEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLSRERAGFEVRDVHHSHYGRMCPIETPEGPNIGLINSLSNYAKVNEFGFIEAPYRKVEKIYGTGEDADKVIKVRVTDSVVYMTADEEEGMTIAQANSPIDAEGYFTNEHVACRRGHDVLEVTPDKVDYMDVSPKEVVSIGTAMIPFLENDDANRALMGANMQRQAVPLLRAQAPLVGTGMEYTAATDSGVCVLAREAGKVVRCWGNEIHVLRDSDGRVDTYRMNKFLRSNQSTCFNQKPIVNRGDHVVKGQVLADGPATDGGELALGYNVLVAFMPWEGYNYEDAILLSEELCKEDIYTSIHIEEYECDARDTKLGAEEITRELPNTGDDTLKNLDEEGIICIGAEVHPGDILVGKATPKGETELTPEERLLRAIFGDKEREVRDTSLRVPHGESGKVVDVKVFTRENGDELQPGVNKLVRVYIAQKRKIHEGDKMAGRHGNKGVVSRVMRKEDMPFLPDGTPVQIVLNPLGVPSRMNIGQVLETHLGWAVQGLGMKIKATDLHIQNVLKEARTDASYWEQIDAIRGLYAEIEELEAKAKEDVTVPHFDIDEKIIDLKSQILGHVESAAQKKLEALGGEARYQELKAIEAKYNALHVEFFDSEEDAPEMDPALVEELEAINKVKTTLNHIESARAKRVEIRQELEGLGYDYETYGMPKPDVAGIHIATPVFDGAHEKDVFETLGIAGRSDDGKTVLYDGRTGEPMDNRVTVGYVYMLKLHHLVDDKIHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQELLTVKSDDVVGRVKAYEKIVKGENIPEPGVPESFKVLLKELQSIGLDVKILNEDQEEVVMKELDDEDEVVETGIEEVMDGSAVETDEVTVVEPEVEEEAPANNGGEDDILSQLAFPMGDSSNDED*