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NECEvent2014_2_3_scaffold_272

Alias: 172_003_scaffold_272

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_272_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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157..2058
DNA (1902bp) protein (634aa)
Carbon-monoxide dehydrogenase, catalytic subunit {ECO:0000313|EMBL:EQG78560.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EQG78560.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pept
Carbon monoxide dehydrogenase n=138 Tax=Clostridium difficile RepID=Q18CR1_CLOD6 rbh
oxidoreductase, acetyl-CoA synthase subunit
NECEvent2014_2_3_scaffold_272_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2039..2524
DNA (486bp) protein (162aa)
Putative oxidoreductase, Fe-S subunit n=6 Tax=Clostridium difficile RepID=U3XEY1_CLODI rbh
Oxidoreductase%2C electron transfer subunit {ECO:0000313|EMBL:CKH79663.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pepto
putative oxidoreductase, Fe-S subunit
NECEvent2014_2_3_scaffold_272_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2499..3725
DNA (1227bp) protein (409aa)
Pyridine nucleotide-disulfide oxidoreductase family protein n=114 Tax=Clostridium difficile RepID=T3ITR4_CLODI rbh
putative oxidoreductase, NAD/FAD bindingsubunit
Putative oxidoreductase, NAD/FAD binding subunit {ECO:0000313|EMBL:CAJ66998.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
NECEvent2014_2_3_scaffold_272_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3864..5051)
DNA (1188bp) protein (396aa)
cfa; Cyclopropane-fatty-acyl-phospholipid synthase (EC:2.1.1.79)
Cyclopropane-fatty-acyl-phospholipid synthase {ECO:0000313|EMBL:EQG78555.1}; EC=2.1.1.79 {ECO:0000313|EMBL:EQG78555.1};; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptost
Cyclopropane-fatty-acyl-phospholipid synthase n=111 Tax=Clostridium difficile RepID=T3IPP9_CLODC rbh
NECEvent2014_2_3_scaffold_272_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5324..6148
DNA (825bp) protein (275aa)
Uncharacterized protein n=100 Tax=Clostridium difficile RepID=G6BQY1_CLODI rbh
ATP-binding protein
Putative ATPase {ECO:0000313|EMBL:CCL29111.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15
NECEvent2014_2_3_scaffold_272_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6277..7542
DNA (1266bp) protein (422aa)
NAD-specific glutamate dehydrogenase n=207 Tax=Clostridium difficile RepID=DHE2_CLODI rbh
glutamate dehydrogenase, NAD-specific
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
NECEvent2014_2_3_scaffold_272_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7852..8343
DNA (492bp) protein (164aa)
BlaR1 peptidase M56 family protein n=9 Tax=Clostridium difficile RepID=T3IJP9_CLODC rbh
Membrane-associated metalloprotease {ECO:0000313|EMBL:CKH79452.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
hypothetical protein
NECEvent2014_2_3_scaffold_272_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8674..9807
DNA (1134bp) protein (378aa)
Peptidase, M56 family n=39 Tax=Clostridium difficile RepID=G6BQY4_CLODI rbh
putative membrane-associated metalloprotease,M56family
Membrane-associated metalloprotease {ECO:0000313|EMBL:CKH79420.1}; Peptidase, M56 family {ECO:0000313|EMBL:CDS83202.1}; Putative membrane-associated metalloprotease, M56 family {ECO:0000313|EMBL:CDS83
NECEvent2014_2_3_scaffold_272_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10049..10324
DNA (276bp) protein (92aa)
Uncharacterized protein n=12 Tax=Clostridium difficile RepID=Q18CS4_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ96694.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficil
NECEvent2014_2_3_scaffold_272_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10723..11745
DNA (1023bp) protein (341aa)
NlpC/P60 family protein n=165 Tax=Clostridium difficile RepID=G6BQY6_CLODI rbh
cell wall hydrolase
Uncharacterized protein {ECO:0000313|EMBL:EQG78712.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_272_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12041..12961
DNA (921bp) protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1151268 species="Ba
Aspartate carbamoyltransferase n=198 Tax=Clostridium difficile RepID=PYRB_CLOD6 rbh
pyrB; aspartate carbamoyltransferase catalytic chain
NECEvent2014_2_3_scaffold_272_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13000..13692
DNA (693bp) protein (231aa)
dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2)
Dihydroorotate dehydrogenase electron transfer subunit {ECO:0000313|EMBL:CKH79346.1}; EC=1.3.5.2 {ECO:0000313|EMBL:CKH79346.1};; Dihydroorotate dehydrogenase electron transfersubunit {ECO:0000313|EMBL
Dihydroorotate dehydrogenase electron transfer subunit n=102 Tax=Clostridium difficile RepID=C9XIV9_CLODC rbh
NECEvent2014_2_3_scaffold_272_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13685..14587
DNA (903bp) protein (301aa)
pyrD; dihydroorotate dehydrogenase 1B (EC:1.3.98.1)
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit; Short=DHOD B;; Short=DHODase B;; Short=DHOdehase B;; EC=1.3.1.14;; Dihydroorotate oxidase B; Orotate reductase (NADH); TaxID=272563 species=
Dihydroorotate dehydrogenase B (NAD(+)), catalytic subunit n=11 Tax=Clostridium difficile RepID=PYRDB_CLOD6 rbh
NECEvent2014_2_3_scaffold_272_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14672..15256
DNA (585bp) protein (195aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00078102}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=
Orotate phosphoribosyltransferase n=218 Tax=Clostridium difficile RepID=PYRE_CLOD6 rbh
pyrE; orotate phosphoribosyltransferase
NECEvent2014_2_3_scaffold_272_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15471..16397
DNA (927bp) protein (309aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
putative ketopantoate reductase (EC:1.1.1.169)
2-dehydropantoate 2-reductase n=96 Tax=Clostridium difficile RepID=T3II82_CLODC rbh
NECEvent2014_2_3_scaffold_272_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16449..17339)
DNA (891bp) protein (297aa)
HTH-type transcriptional regulator CysL n=170 Tax=Clostridium difficile RepID=T3INA8_CLODC rbh
Transcriptional regulator, LysR family
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CAJ67011.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
NECEvent2014_2_3_scaffold_272_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17527..18558
DNA (1032bp) protein (344aa)
Uncharacterized protein n=38 Tax=Clostridium difficile RepID=G6BRG5_CLODI rbh
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CAJ67012.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diff
Displaying 17 items

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