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NECEvent2014_2_3_scaffold_122_14

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(15221..16183)

Top 3 Functional Annotations

Value Algorithm Source
D-ribose ABC transporter, substrate-binding protein n=176 Tax=Clostridium difficile RepID=C9XJ75_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 320.0
  • Bit_score: 616
  • Evalue 1.60e-173
  • rbh
D-ribose ABC transporter substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 320.0
  • Bit_score: 616
  • Evalue 4.40e-174
ABC-type transport system, ribose-specific extracellular solute-binding protein {ECO:0000313|EMBL:CCL30044.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococca similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 320.0
  • Bit_score: 616
  • Evalue 2.20e-173

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 963
ATGAGAGTGAGAAAAATTTTATCTTTAGGAATTGCTGGAATACTAGCAATAGGAATGTTAACAGGGTGTTCAATGGAAGGACCAAGTAAATCAGATAATAAAGGTGGTTCAGACAAGAAAGATTTAACTATTGGAGTATCTACAATAACTCTTCAACATCAATTTTTTATAGATATTGATGAGGGAATAAAAGAAAAAGCTAAAGAATTAGGTGTGAAAGTTATAGTAAATGACCCAGACCAAGATGTAGCTAAGCAAACATCAGCAATAGAAGATTTTATACAACAAAATGTAGATGGAATGATAGTACTTGGAACTGATAATTCGGCTATAGTACCAGCAGTAGAAGGAGCATTTGAAAAAATGCCAGTAGTTACAGTAGATGCTGTATTAAATACTGAAAATATTACAAGTTATGTAGGAACAGTTAGTTATGATGCTGGTAAAAAATTAGGGGAATACACTAAAAAATACATAGATGAAAAGTTAGGTGGAAAGTCAGAAATAGCAATAGTGACAGATTTAAAATCTCAAATACAAATGCAGAGAATAGATGGATTTAAAGATGCATTAAAAGGTTCAGCAAATGTTAAGATATTAAATTCACAACCAGGATATGACAGAGAAGAATCTCTTAATACAGTAGAAAACTTAATTCAATCTAATCCAGATGTAGATATAATATATGCAACAGCTGAAAATAGTGTACTAGGAGCTAAAGCTGCACTTGAATCTGCAAAAAATAAGGATGTTAAGATTGTAGGATTTGACTTAACTGAAGAAGCATCAAGTGGAATAACAGATGGAACTATTCTTGCTATGATTCAACAACAACCTAAAGAGATGGGACGTTTAGCTGTAGAAGCAGTAGTAAAAGCTATAAAAGGGGAAAAGGTAGAAAAGAATATACCAGTACCAGCTTTACTTTATGATAAGGAAAATATAAAAGACTTTAAGAATTAG
PROTEIN sequence
Length: 321
MRVRKILSLGIAGILAIGMLTGCSMEGPSKSDNKGGSDKKDLTIGVSTITLQHQFFIDIDEGIKEKAKELGVKVIVNDPDQDVAKQTSAIEDFIQQNVDGMIVLGTDNSAIVPAVEGAFEKMPVVTVDAVLNTENITSYVGTVSYDAGKKLGEYTKKYIDEKLGGKSEIAIVTDLKSQIQMQRIDGFKDALKGSANVKILNSQPGYDREESLNTVENLIQSNPDVDIIYATAENSVLGAKAALESAKNKDVKIVGFDLTEEASSGITDGTILAMIQQQPKEMGRLAVEAVVKAIKGEKVEKNIPVPALLYDKENIKDFKN*