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NECEvent2014_2_3_scaffold_122_29

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(28718..29206)

Top 3 Functional Annotations

Value Algorithm Source
PTS system, mannose/fructose/sorbose IIB component {ECO:0000313|EMBL:CCL30030.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCL30030.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pe similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 317
  • Evalue 8.20e-84
PTS system sorbose subIIB component family protein n=200 Tax=Clostridium difficile RepID=C9XJ62_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 317
  • Evalue 5.90e-84
  • rbh
PTS system transporter subunit IIB similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 162.0
  • Bit_score: 317
  • Evalue 1.60e-84

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 489
ATGGCAAAAATAACATTAGTAAGAGTAGACCACAGATTAATTCATGGGCAAGTTATAACAAAATGGGTAAAAATCGCTCAAGCTCAAAAAATAATAATAGTTGATGACTTCTTAGGTCAAGATGAATTTATGGCTGACATATATAAAATGGCAGCACCATCAGGAGTAGAAGTAGTTATTTTAACAGCAGAAGATGCGGGACAAGCATTCCAAAACAACACTTTAGGAGATAAAAATATATTTATTCTATTTAAAAATGTTGATATGGCAAATAAGGCTTATAAAGCTGGACTTAAATATGAAAAGATTCAATTAGGAGGTATTCCAAATGAAGCAGGAAAGAAAATGGTGTTTACAGCTGTTTCATTAGGAAATGAGGATGTAGAACAACTTAATGAACTTAATGAAAATGGGGTTGAAATAGTCCTACAAGTTATACCAGAGGAATCATCTATGACATATGAAAATGCGTTAAAGAAATTTAAATAA
PROTEIN sequence
Length: 163
MAKITLVRVDHRLIHGQVITKWVKIAQAQKIIIVDDFLGQDEFMADIYKMAAPSGVEVVILTAEDAGQAFQNNTLGDKNIFILFKNVDMANKAYKAGLKYEKIQLGGIPNEAGKKMVFTAVSLGNEDVEQLNELNENGVEIVLQVIPEESSMTYENALKKFK*