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NECEvent2014_2_3_scaffold_122_40

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(38052..38963)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix s, AraC family protein n=15 Tax=Clostridium difficile RepID=T3IH17_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 613
  • Evalue 9.60e-173
  • rbh
Transcriptional regulator, AraC family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 613
  • Evalue 2.70e-173
AraC family transcriptional regulator {ECO:0000313|EMBL:CKH76113.1}; Transcriptional regulator, AraC family {ECO:0000313|EMBL:CEJ96791.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 303.0
  • Bit_score: 613
  • Evalue 1.30e-172

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 912
ATGCATGCATGGGAGTCTATTCAAATTACATTGGATTTAATAGAAGCAAATTTATCAGAAGAAATATCAATTAATGAATTAGCAAATAAAGCAAATTTATCACCATTTTACTATCAAAGACTATTTAAAAGATTGGTAAATAAGACTGTAATGGAGTATATAAAGCTTCGTCGTCTTGCAAGAGCTTCTGAATACTTAGCAGAACATAAGAATCGTATACTTGATGTAGCTTTAAATTTTGGATTTGCTAGTCATGAGACATTTACACGTTCCTTTAAAAAAGCATATGGATTAACTCCAGAAAAATATAGAGCAAATCCAGTAAAACTCAATCACTTTATTAAGCCAGAATTAATTTTAAATTATGCTATGGTTGATGAAGGTGTTCCACTGATTGCAGATGATATAGTGATTGAAGTTAATCGTAAGACATTGAGTAATCCAAGGACATTTGTTGGAATAGAAATAGAAGTACCTATTTGCCAGTTGGTAGGCGGTGAAACAACTGGAATTGCAATAGTAGAGGAATTATGGATGAAACTTGGAAGTCAAAGACATAATATACCAAATCAAATTCCAGGTGGAAATGAATTTGCTGCTCTTTATATGGGAAATGCAAAAGAAGGAAATTGTATGTATATGGCAGGTGTAGAGGTAGAGTCAGGTACATCAGTAGAAGGATATAGTACTTTTGAGTTGCCAGTTAAAGAATATTTAGTATGTGGATTTGAGGCAGAAAACTTTAATGAGTTAGTTAATTCAGCTGTTTTTAAAGCAGATAAATTTATGGAAAGATGGATGAAGAAACATAATTTAACAACTACTGATTTTGCAATTGAGATGTATTACCCCACTACACCTGAAGCAGCATATCTGGAACATTGGATTGTTCCGGTTCCTATTGAACAATAG
PROTEIN sequence
Length: 304
MHAWESIQITLDLIEANLSEEISINELANKANLSPFYYQRLFKRLVNKTVMEYIKLRRLARASEYLAEHKNRILDVALNFGFASHETFTRSFKKAYGLTPEKYRANPVKLNHFIKPELILNYAMVDEGVPLIADDIVIEVNRKTLSNPRTFVGIEIEVPICQLVGGETTGIAIVEELWMKLGSQRHNIPNQIPGGNEFAALYMGNAKEGNCMYMAGVEVESGTSVEGYSTFELPVKEYLVCGFEAENFNELVNSAVFKADKFMERWMKKHNLTTTDFAIEMYYPTTPEAAYLEHWIVPVPIEQ*