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NECEvent2014_2_3_scaffold_87_23

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(22033..22572)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix family protein n=1 Tax=Clostridium difficile Y266 RepID=T4FA44_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 179.0
  • Bit_score: 364
  • Evalue 6.00e-98
  • rbh
Transcriptional regulator, HTH-type similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 151.0
  • Bit_score: 306
  • Evalue 5.50e-81
Cro/CI family transcriptional regulator {ECO:0000313|EMBL:CKG88332.1}; Transcriptional regulator, HTH-type {ECO:0000313|EMBL:CEJ99587.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostrid similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 151.0
  • Bit_score: 306
  • Evalue 2.70e-80

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 540
ATGCAACATTTTTTTATATTTTCCAATATATGTGTTGCATTTATGAAAAAATACTTTATAATATATTTTATAGAGGTGATAAATTTGAATACTGAAAATGATTTAAAAATGTTGGAGATTACAAATAGAATAAAAAATAAACGATTAGAACTTAATATGTCTTATCAAGATTTAGCTAACAAGACTGGACTAAGTAAGTCCACTTTACAGAGATATGAAACGGGAGCTATAAAAAATATTCCTCTTGATAAGCTAGAAATTTTAGCACATGCATTAGATGAATCTCCTGCTTTTATAATGGGGTGGAACGAAGACTGCAAACAAATTAAAATTAAAGAAAATAAGCTTTTATCAAGCTTTAATGCCTTAAACGATATTGGACAAAATGAAGCAATAAAAAGAGTAGATGAACTTACTCAAATAGGTAAATATGTAAATAAAAATCACATAGACACAATAGCGGCACACAATGAACATTTACATGAAGAAGGAGAAATTGAAAAAATATATCAAGATTTAGATGATATGGATAATTGGTAA
PROTEIN sequence
Length: 180
MQHFFIFSNICVAFMKKYFIIYFIEVINLNTENDLKMLEITNRIKNKRLELNMSYQDLANKTGLSKSTLQRYETGAIKNIPLDKLEILAHALDESPAFIMGWNEDCKQIKIKENKLLSSFNALNDIGQNEAIKRVDELTQIGKYVNKNHIDTIAAHNEHLHEEGEIEKIYQDLDDMDNW*