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NECEvent2014_2_3_scaffold_71_13

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 11535..13535

Top 3 Functional Annotations

Value Algorithm Source
Sensory box protein n=29 Tax=Clostridium difficile RepID=T3HVQ1_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 666.0
  • Bit_score: 1299
  • Evalue 0.0
  • rbh
Transcriptional regulator, sigma-54-dependent similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 666.0
  • Bit_score: 1299
  • Evalue 0.0
Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:CKG96337.1}; Transcriptional regulator, sigma-54-dependent {ECO:0000313|EMBL:CEJ97757.1}; TaxID=1496 species="Bacteria; Firmicutes; Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 666.0
  • Bit_score: 1299
  • Evalue 0.0

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2001
ATGAAACAATCAATAGCTATAGTAACTGATAAAATAACTAAACTATCATCTTTCTTAGAAGAAAATATACGTTTGGTTTTAGGTAATTATATTGATATAAACCACTATTATCTGGAAGTTTTAAGAGAGAATGATAAAATACAAGGTGATTTTGTACTAGTAATGAATGACGATAGATTAAACAGTATGAGAAAGCATTTAGTACAAGATAGTAAGATTATAGTGATAAGGAGAACACTTAAAGAAAATGAAATATATGGATTATTTTCAATACCAAATGGAACTGAAGTATTGGTTGTAAATGATACAAAAGAAACTACCTTAGAAACGATAAGCTTATTTTACAAAATAGGAGTAAAAAATTTAAAGTTTACTCCATATATTGAAGGAAAAATTTATAAAAATATAGACATAGCTATAACGCCTGGAGTAAAGGGAAAAGTACCAAGTTATATAAATAAAGTAATCGACCTTGGAAATAGATATATTGATATATCTACCTTTATAGAAATAATAAATGGTCTTAGAATAGATGTTAAAGAAATACGTAAAAATTTAATGGCATATTCTGAGAGTTTAATAAGTTTAGATAATGGAGTTAAAGATAATTATAGGCAACTGTTTTTAAAAATAGAAGAACAAGATGTTATATTGAATCTATCAAAAGATGGAATAATATTTACTTCAGCAGATGGTATAATAAACACATTTAATAAAGAAGCTTTAAAAATTTTAGGTATAAATGAAAATCCACAAGGCAAAAACATAGAAGATATCATTTCTGAAGATTTAAATATTTTACTTGAAGACAAAGAAATAATTGATGAAGTGGTATTTACAAATAAAAAATATATAAATGTAAATAAAAAAAATATTTTTTCTATGGGGAATAAAGCTGGGATATATTATAACTTACAAGAAATAACGTATATAAAAAAATTAGAACAAAATCTTACTAATAAATTAAGAGAACAAGGTCAGATAGCAAGATATACATTTAAAGATATAAAAACTAAAAATAAAAATATGGTAAAGTGTGTAGAATTGGCTAAAAAAATATCTAAATCAGACCTTTCTGTATTAATAATAGGAGAAAGTGGTACTGGTAAAGAATTATTATCACAATCAATTCATAATGCTTCCAATAGAAGTAATCAACCGTTTATAGCAGTTAATTGTGCAGCAGTTCCAGATAGTCTATTAGAAAGTCAACTGTTTGGATATGAAAAAGGCTCTTTTACAGGAGCTTTAAGAGAAGGAAAAAAGGGTCTATTTGAACTTGCTAATAATGGAACTATATTTCTGGATGAAATTGGAGATATGCCTCCATTGCTACAGACAAAGTTACTAAGGGTATTACAAGAAAAGCAGGTTATGCCTATAGGTTCCCATAATGTTATAAACATAGATGTTAGGGTCATAGCAGCAACAAACAAAAACTTACTAAAGATGATTAGAGAAGGAAAATTTAGAGAAGACCTGTATTATAGACTAAATGTATTGCCAATAGATGTACCATCATTGAGGAATAGAAAAGAAGATATAATAACACTTATGAATTTCTTTTTGAAAAACAATATAAGACTTTCGCCAGAAGTTATAACTATTTTAGAAAAATATAATTGGCCAGGAAATATAAGAGAGTTACAAAATGTTGCTTCTTATGTAAGTCTAATGTGTGATAGTATGGTTTTTAGAGATGACTTACCACCATATATAAGGGTAGAATGTGCTAACAATTATGAAGATGGATTTGGTTATACAAGAAAAGAATTTGAGGAAATACTGAGGATTCTATATGAAAGAAGAGAGTCATCCTCTGGAATTGGAAGAGGGTTTATAATCGAAAAGCTTATACAGGAAGGTATTGAGATTTCTGAAAGCAAAGTTAGAAAGGTGCTATCTTATTTAAGTGAATGTGGATACATATCATCTAAATCTGGTAGAGGAGGAAGTCAAATAACTTCAGAGGGGATAAAACTTTATAATAATATAAATTAA
PROTEIN sequence
Length: 667
MKQSIAIVTDKITKLSSFLEENIRLVLGNYIDINHYYLEVLRENDKIQGDFVLVMNDDRLNSMRKHLVQDSKIIVIRRTLKENEIYGLFSIPNGTEVLVVNDTKETTLETISLFYKIGVKNLKFTPYIEGKIYKNIDIAITPGVKGKVPSYINKVIDLGNRYIDISTFIEIINGLRIDVKEIRKNLMAYSESLISLDNGVKDNYRQLFLKIEEQDVILNLSKDGIIFTSADGIINTFNKEALKILGINENPQGKNIEDIISEDLNILLEDKEIIDEVVFTNKKYINVNKKNIFSMGNKAGIYYNLQEITYIKKLEQNLTNKLREQGQIARYTFKDIKTKNKNMVKCVELAKKISKSDLSVLIIGESGTGKELLSQSIHNASNRSNQPFIAVNCAAVPDSLLESQLFGYEKGSFTGALREGKKGLFELANNGTIFLDEIGDMPPLLQTKLLRVLQEKQVMPIGSHNVINIDVRVIAATNKNLLKMIREGKFREDLYYRLNVLPIDVPSLRNRKEDIITLMNFFLKNNIRLSPEVITILEKYNWPGNIRELQNVASYVSLMCDSMVFRDDLPPYIRVECANNYEDGFGYTRKEFEEILRILYERRESSSGIGRGFIIEKLIQEGIEISESKVRKVLSYLSECGYISSKSGRGGSQITSEGIKLYNNIN*