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NECEvent2014_2_3_scaffold_192_23

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 18922..19623

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=153 Tax=Clostridium difficile RepID=T3INL9_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 448
  • Evalue 5.40e-123
  • rbh
fliA; RNA polymerase sigma-28factor for flagellaroperon similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 448
  • Evalue 1.50e-123
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 233.0
  • Bit_score: 448
  • Evalue 7.50e-123

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 702
ATGAATAGAGAAGAATTAATAAAAGAGAATATGCCTCTTGTAAAGAGTATAGCAAGAAAATTTTTTATACCAGGGAAAGGTTTTGAATATCAAGACTTAGTAAATAGTGGAGTCATTGGATTGATTGATGCAATAAATAAATTTGATGCTGAAAAAGGGGCAAAGTTTTCTAGTTACTCTTATATAAAAATAAAATCTGCTATATTAGATGAAATTAGAAATCAAAGTCCAATTTCTAAACATAATCTAACTAAAGTAAATAAGTATAATAGAGTGGTAGAAAAGTTGCAATCTAAATTATTAAGAGAGCCAACTTCATATGAAATTGCAAAAGAATTAAAGGTTTCAGAAAAAGAACTTCATGATATCGAAAGTAATATAGATATGTTAAATATTGTATCATTAAACTATGTAATCTTTGAAGATACAAATGAAACTGTACAAGATGTAATAAGTGATAGAGAAGAGGAAGCTCCAGAAAATATAATAGAAGAAGAAGAAAAGTTAGAGATTCTATCCAAAGCAATTAGTAATTTAAATGAAAGAGAAAAATTAATACTTTCACTGTACTATTATGAAGATTTAAATCTAAAGGAGATAGGAAAAGTGCTAGGTGTTTCAGAATCAAGAGTTTCACAACTCCACAGAAAATCAATAAGAAACTTAAGAAACAAGATAAAAGAACTTAAATATTCTATATAG
PROTEIN sequence
Length: 234
MNREELIKENMPLVKSIARKFFIPGKGFEYQDLVNSGVIGLIDAINKFDAEKGAKFSSYSYIKIKSAILDEIRNQSPISKHNLTKVNKYNRVVEKLQSKLLREPTSYEIAKELKVSEKELHDIESNIDMLNIVSLNYVIFEDTNETVQDVISDREEEAPENIIEEEEKLEILSKAISNLNEREKLILSLYYYEDLNLKEIGKVLGVSESRVSQLHRKSIRNLRNKIKELKYSI*