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NECEvent2014_2_3_scaffold_196_17

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 19523..20788

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S1 n=157 Tax=Clostridium difficile RepID=Q18AI4_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 421.0
  • Bit_score: 814
  • Evalue 5.20e-233
  • rbh
30S ribosomal protein S1 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 421.0
  • Bit_score: 814
  • Evalue 1.50e-233
S1 RNA binding domain protein {ECO:0000313|EMBL:EHJ31334.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 421.0
  • Bit_score: 814
  • Evalue 7.20e-233

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1266
ATGGAAAATGATTTAACAATGCAAGAATTACTTGACCAGCAAGAACAAGTATTCAGCAAAGTGAAAGTTGGAGAATTGACAACTGGAAAAATAACTGCAGTGAGAAATGATGAAGTACAATTAGGATTAGACTATGGGTTTGATGGAATAATACCTATAAGTGAATTGAACATAGAAAAAAATCAATATATAGAAGATATATACCACATAGGTGATGAAATAACTGCTGTAATAACAAAAGTATCTCAAAAAGATGGTACAATAACTTTATCTAAATTACAACTTGACAAAAGAAATGATTTTGCCGAGTTACAAAAGGCTTATGATGAACATAGAATAATAACTGTAAATGTTGAAAAGAATATAGATAAAGGTGTATTTGCTAATTACAATACATATACATTTTTTATACCAATTTCTCAACTTGATACAAAATTTATTACAGATACATCTAAATTTGTTGGTCTTAACTTAGAAGTTTATATAAAAGAATTGGATGTTAGAAAAAATAGACTTGTAGCATCTCATAGAGATGTATTACAAGAGCGTATAAATAAAGAGAGAGAAGAAAGAAGAGCTCAAATTAAGGCAGAAAAAGAAGCTGAAAGAGCAAGAATTAAGCAAGAAAGAGAAGAAGAAAAAGCTCGTATCAAAGCAGCTAAAGAAGACTTATTTAATTCTCTTGAAGTTGGACAAAAAAGAGATGGTAAGGTGACAAAGATAATGCCTTATGGTGCATTTGTGGATATTGGTGGGATTGAAGGATTAGCACATATAAATAATTTAGCTTGGACAAGAGTTGAAAGTGTTGAAGATGTTGTTTCAGAGGGACAAGAAGTAGAAGTTTATGTGTTGGATGTAAATAAAGAGACTAAAAAAATTGCCTTGGCATTAAAAGACATAAATAATGACCCTTGGGATTTAATAGCAAAAGAAGTACAAATTGATGATGTTGTCAATGCTAAAGTTCTTAGAATAATAGAAAAAGGGGCTTTTGTTCAAATTAAAGAAGGTGTAGATGCGTATTTACCAATATCTGAATTGAGTGATACTAGAGTGGCTAAAGTTACTAATGTTGTTAATATTGGAGATGAGGTTAAAGTTAAGATTCTTGATTTTAAACCAAAGACTAAGAGAATGTTGGTTTCAATAAAAGAAGCAACTAGAGAGCCAGAAGAGGATATAACAGAATACCTAGAAGTAGAGGAATCTTTAGGAAGTATTGGAGAATTATTTAAAGATAAATTTAAAGATTTAGAAGTGTAA
PROTEIN sequence
Length: 422
MENDLTMQELLDQQEQVFSKVKVGELTTGKITAVRNDEVQLGLDYGFDGIIPISELNIEKNQYIEDIYHIGDEITAVITKVSQKDGTITLSKLQLDKRNDFAELQKAYDEHRIITVNVEKNIDKGVFANYNTYTFFIPISQLDTKFITDTSKFVGLNLEVYIKELDVRKNRLVASHRDVLQERINKEREERRAQIKAEKEAERARIKQEREEEKARIKAAKEDLFNSLEVGQKRDGKVTKIMPYGAFVDIGGIEGLAHINNLAWTRVESVEDVVSEGQEVEVYVLDVNKETKKIALALKDINNDPWDLIAKEVQIDDVVNAKVLRIIEKGAFVQIKEGVDAYLPISELSDTRVAKVTNVVNIGDEVKVKILDFKPKTKRMLVSIKEATREPEEDITEYLEVEESLGSIGELFKDKFKDLEV*