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NECEvent2014_2_3_scaffold_196_22

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 25601..26092

Top 3 Functional Annotations

Value Algorithm Source
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 328
  • Evalue 1.20e-87
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 328
  • Evalue 6.10e-87
3-isopropylmalate dehydratase small subunit n=198 Tax=Clostridium difficile RepID=LEUD_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 163.0
  • Bit_score: 328
  • Evalue 4.40e-87
  • rbh

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 492
ATGATTGCCAATGGAAGTGTTTTTAAATTCGGTGACAATATAGATACAGATGTAATAATACCAGCTAGATATTTAAATATAGCTGATTATAAAGAACTAGCAACGCATTGTATGGAGGATATTGATGATAAATTTATCTCTAAGGTAAAAAAAGGAGATATTATAGTTGCAACTAAAAACTTTGGTTGTGGTTCATCAAGAGAACATGCACCAATTGTAATAAAAGAAAGTGGAGTATCCTGTGTGATTGCTTCTACTTTTGCTAGAATATTTTTTAGAAACTCTATAAATATAGGGCTTCCTATACTTGAATGTGAAGAAGCTGCCAATAACATAGATGAAGGGGATAATATAGAAGTAGATTTTTCTACAGGTGTGATAAAAAATATAACAAAAGGAAAAGAATATAAAGCAGAACCATTTCCTGAGTTTATGCAAAATATTATATTAAATGAAGGCTTAATTAACTCAATAAAAGCAAATAGGGGGTAG
PROTEIN sequence
Length: 164
MIANGSVFKFGDNIDTDVIIPARYLNIADYKELATHCMEDIDDKFISKVKKGDIIVATKNFGCGSSREHAPIVIKESGVSCVIASTFARIFFRNSINIGLPILECEEAANNIDEGDNIEVDFSTGVIKNITKGKEYKAEPFPEFMQNIILNEGLINSIKANRG*