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NECEvent2014_2_3_scaffold_242_31

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 15001..15948

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 612
  • Evalue 4.10e-172
DNA-directed RNA polymerase subunit alpha n=192 Tax=Clostridium difficile RepID=RPOA_CLOD6 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 612
  • Evalue 2.90e-172
  • rbh
rpoA; DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 315.0
  • Bit_score: 612
  • Evalue 8.20e-173

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 948
ATGATAGAAATAGAAAAGCCAAAAGTAGATATAGTTGAGCTTAGCGAAGACTATAGATATGGTAAGTTTGTTATAGAGCCTCTAGAAAGAGGATATGGAATAACTATAGGTAACGCATTAAGAAGAATATTATTATCATCATTACCAGGTGTAGCAGTGAATGCTATAAAAATAGATGGAGTTCTTCATGAATTTTCAACAATACCTGGTGTTAAAGAAGATGTTACTGAGATAATATTAACTTTAAAAGAGCTTTCAGCAACTATAGATGGTGAAGGAAGTAGAACACTTAAAATAGAAGCTCAAGGACCATGCTCTATCACAGGTGCAGATATAATCTGTCCTCCAGATGTTGAAATATTAAGTAAAGATTTAGCAATAGCTACATTAGATGATAATGCTAAACTTAATATGGAGATATTTGTAGATAAAGGTAGAGGTTATGTTTCTGCTGAAGAAAATAAAACAGAGAATGTTCCAATAGGTGTTTTACCTGTGGATTCAATATATACTCCTGTTGAGAAGGTTAGTTATCATGTGGAAAACACAAGAGTTGGTCAAAAAACAGATTATGATAAATTAGTACTAGAAGTTTGGACTAATGGTAGTATAAATCCTCAAGAGGGAATATCATTAGCTGCAAAGGTATTAGTTGAGCATTTAAACTTATTTATAGACTTAACTGAACATGTAAGTAGTGTTGAAATCATGGTAGAAAAAGAAGAAGATCAAAAAGAAAAAGTTCTTGAAATGACTATAGAAGAATTAGATTTATCAGTTAGATCATATAACTGTTTAAAGAGAGCGGGAATTAATACAGTTGAAGAATTAGCTAATAAATCTGAGGATGATATGATGAAGGTTAGAAACCTAGGTAAGAAGTCATTAGAAGAGGTAATACAAAAACTAGAAGAACTTGGATTGGGATTAAAACCAAGTGAAGAATAG
PROTEIN sequence
Length: 316
MIEIEKPKVDIVELSEDYRYGKFVIEPLERGYGITIGNALRRILLSSLPGVAVNAIKIDGVLHEFSTIPGVKEDVTEIILTLKELSATIDGEGSRTLKIEAQGPCSITGADIICPPDVEILSKDLAIATLDDNAKLNMEIFVDKGRGYVSAEENKTENVPIGVLPVDSIYTPVEKVSYHVENTRVGQKTDYDKLVLEVWTNGSINPQEGISLAAKVLVEHLNLFIDLTEHVSSVEIMVEKEEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVEELANKSEDDMMKVRNLGKKSLEEVIQKLEELGLGLKPSEE*