ggKbase home page

NECEvent2014_2_3_scaffold_615_1

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 43..1020

Top 3 Functional Annotations

Value Algorithm Source
Oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein n=100 Tax=Clostridium difficile RepID=T3GGB5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 325.0
  • Bit_score: 646
  • Evalue 1.10e-182
  • rbh
ABC-type transport system, ATP-binding protein putative oligopeptide transport system {ECO:0000313|EMBL:CDS84970.1}; Oligopeptide ABC transporter (ATP-binding protein) {ECO:0000313|EMBL:CDS88667.1}; E similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 325.0
  • Bit_score: 646
  • Evalue 1.50e-182
ABC-type transport system, ATP-binding protein;putative oligopeptide transport system similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 325.0
  • Bit_score: 644
  • Evalue 1.20e-182

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 978
ATGAGTAAAGCACTAATTGAGGTTAAAGATTTAAAAGTTTATTTTCATACAGATAAAGGGATTGTAAAGAGTGTAAATGAAGTAAGTTTTAATATAAATGAAGGTGAAACTATTGGAATAGTTGGAGAATCAGGATGTGGTAAGTCTGTAACAGCCATGTCTTTGATGAAGTTACTTCCAACATCAAAAATAGAAGGTGGAGAAATAATCTTTCGAGGCAAAGACATTTTAAAGATGAATGAAGATGAACTTATGGGAATAAGAGGGAATGAGATATCAATGATTTTTCAAGAACCAATGACATCTTTAAACCCAGCGTTTACTGTTGGAAGTCAAATCATTGAAGGTATTATGATACATCAAGATTTATCAAAGGAAGAAGCTAAGAAAAAGGTAATCGATATGATAAAACTGGTAGAAATACCAAGAGCTGAAGAAATATATAATTCATATCCACATGAATTATCAGGTGGTATGAGACAACGAATAATGATAGCTATGGCTTTATCATGTAATCCAAAATTACTTATAGCTGATGAACCAACAACAGCTTTAGATGTTACTATTCAAGCTCAGATTTTAGATATAATGAAAAATATAAAAGAAAAATTAAACACATCTATAATGATGATTACACATGATTTGGGAGTAGTTGCAGAAATGTGTGACAAAGTATTAGTGATGTATGCTGGTAAAATTATAGAAGTGGCAGAGGTTGTTGAATTATTTAAAAATCCAAAACATCCTTATACTATTGGACTTCTAAAATCAAAGCCTGCTCTTGGAAAAAACAAAGATAAAAGATTGTATTCGATTCCAGGACAAGTACCAAATCCAATTGGAATGCCAGATTCATGTTATTTTAGTGATAGATGTGAAAAAGTATGTGATAAATGTAGAACTCAGATACCTCCTTTAATAGAATTGAATAGTGGTCATAGTATTGCATGTTGGTTATATAAAAAGGAGGAGATATAA
PROTEIN sequence
Length: 326
MSKALIEVKDLKVYFHTDKGIVKSVNEVSFNINEGETIGIVGESGCGKSVTAMSLMKLLPTSKIEGGEIIFRGKDILKMNEDELMGIRGNEISMIFQEPMTSLNPAFTVGSQIIEGIMIHQDLSKEEAKKKVIDMIKLVEIPRAEEIYNSYPHELSGGMRQRIMIAMALSCNPKLLIADEPTTALDVTIQAQILDIMKNIKEKLNTSIMMITHDLGVVAEMCDKVLVMYAGKIIEVAEVVELFKNPKHPYTIGLLKSKPALGKNKDKRLYSIPGQVPNPIGMPDSCYFSDRCEKVCDKCRTQIPPLIELNSGHSIACWLYKKEEI*