ggKbase home page

NECEvent2014_2_3_scaffold_357_3

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: 1621..2256

Top 3 Functional Annotations

Value Algorithm Source
HlyD secretion family protein n=91 Tax=Clostridium difficile RepID=T3GGR5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 211.0
  • Bit_score: 413
  • Evalue 1.30e-112
  • rbh
HlyD secretion family protein {ECO:0000313|EMBL:EQE60553.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 211.0
  • Bit_score: 412
  • Evalue 4.20e-112
conserved hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 211.0
  • Bit_score: 410
  • Evalue 3.20e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 636
TTGAAAAAGGTAAAATATACCAGATTAGTGATACTTGGTATTCTTATATATTTAGTATTTAATATATTAGTAATGATAATTAGCAAAAATGTAGATACGTTGGTGTTAAAAAATGAAAAAGTTGATGCAAAGATTCATGTAAAAGGAACTATAGAAAAAGATGCCAATGACCAGAGTAATTATCTATCTACATACATCAGTAAAGAAGATTCTAATAACTTTGAAAAAAATCAAAATGTAATAATTGAATATCATGAGCAAAAATTAGATGCAAAAGTTTACAAAATATATGAAAATAATAATAAAATAATGGTAAAATTAAAAATAAGTAACCAAATTGTTGCAAATCAGGATACAAGTGTCGAAGAATTTGATATAATATATAATCAGATGGAATGTTTAAAAATACCTAAAACTTCTATAAAAACAAAAGACAATAAACGTGGTGTATATGTAATTGATGAACAATCACAAAGTGTAAAATTTGTCATATTAGAAGGAATAACTTATGAGAATGAATCTTCTGTATTTGTGGATTATTATAAAAATGACATAAATGGAGTTACAAGTGTTAATCTATATGACAAAATAATTTTAAGACCTAACAGTATAAACACAAATATAAGGATAAAGTAG
PROTEIN sequence
Length: 212
LKKVKYTRLVILGILIYLVFNILVMIISKNVDTLVLKNEKVDAKIHVKGTIEKDANDQSNYLSTYISKEDSNNFEKNQNVIIEYHEQKLDAKVYKIYENNNKIMVKLKISNQIVANQDTSVEEFDIIYNQMECLKIPKTSIKTKDNKRGVYVIDEQSQSVKFVILEGITYENESSVFVDYYKNDINGVTSVNLYDKIILRPNSINTNIRIK*