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NECEvent2014_2_3_scaffold_313_6

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(4403..4819)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70, region 4 family protein n=17 Tax=Clostridium difficile RepID=T2TTI4_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 279
  • Evalue 2.00e-72
putative conjugative transposon proteinTn916-like, CTn7-Orf3 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 279
  • Evalue 5.50e-73
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:CKG75598.1}; Putative conjugative transposon proteinTn916-like, CTn7-Orf3 {ECO:0000313|EMBL:CEK00031.1}; TaxID=1496 species="Bac similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 279
  • Evalue 2.70e-72

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 417
ATGAAACCATCTTCTTTCGAGGGCGCTATCAGACTTCAATTTGATTGTCTGGCTCGCAAGGTTGTAGGACGAACTGTAAAGAACTATGACCGAGAGCTTGGCAGACGTGCAAGACGTGAAACGCCGTTCTGTGATTTATCTGAAATGGAGTTAAACCAGATCGGTGTCATGGACGAGTATTGCGTTGAGTTTACGTCATTTGATGTATTTGGTTCAGAAGTCCATATCTATGATGAACGCTTATGTGAAGCTATCAAAGAATTAACAGAAAGCCGACGTAACATTCTGCTTATGTCCTACTTTCTTGAAATGACCGACGCTGAAATTGCAGAGGTTATGGAAATGGAACGATTTTCCGTATGTAGAAACAGGCTGCACACATTAAAGCTTATTAAGGATATGTACGAGGAGGAATAA
PROTEIN sequence
Length: 139
MKPSSFEGAIRLQFDCLARKVVGRTVKNYDRELGRRARRETPFCDLSEMELNQIGVMDEYCVEFTSFDVFGSEVHIYDERLCEAIKELTESRRNILLMSYFLEMTDAEIAEVMEMERFSVCRNRLHTLKLIKDMYEEE*