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NECEvent2014_2_3_scaffold_667_3

Organism: NECEvent2014_2_3_Peptoclostridium_difficile_28_21

near complete RP 49 / 55 BSCG 51 / 51 ASCG 13 / 38 MC: 2
Location: comp(1492..2103)

Top 3 Functional Annotations

Value Algorithm Source
Amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein n=214 Tax=Clostridium difficile RepID=C9XR50_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 391
  • Evalue 4.00e-106
  • rbh
amino acid ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 391
  • Evalue 1.10e-106
ABC-type transport system, aminoacid-family permease {ECO:0000313|EMBL:CCL29984.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 391
  • Evalue 5.60e-106

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 612
ATGTTACAAGGTTTAGAGATAGTTATAGCAATGTTTTGTATAACATTGATAGTATCAATTCCATTGGGGATTGGAGTTGCATTTTTAAGATTATCAAAGAATAAATTAGTAAGTGGTATTACACAATGTTATATATTGATAATGAGAGGTACACCTTTACTTTTGCAAATGATAGTCATATTTTACGGATTACCTCTTTTAGGAATTGTATTTGACAGATTTACAGCTGGAGTAGTAGCTTTCTTCTTAAATTATGCAGCATATTTTGCAGAAATATTTAGAGGTGGAATACAGTCAATCGATAGAGGACAATATGAAGCTTCAAAAGTACTAGGATTTGATAAGTTTACTATGTATAAGAGAGTAATCTTTCCACAAGTTTTTAAAAGAATACTAGCACCTATTTCAAATGAAGTAATCACATTAGTAAAAGATACATCTTTAGTATATATATTAGGATTAAATGATATTTTAAGAATATCTCAAATAGCAATGAACAGGGAAGCAAGTCTGTTACCATTATTTGAGGCAGGAGCGATATATCTTATATTTGTAGCTATACTTACTAAGGGATTTGAATTACTTGAAAAAAAATATTCTTATTATAGATAA
PROTEIN sequence
Length: 204
MLQGLEIVIAMFCITLIVSIPLGIGVAFLRLSKNKLVSGITQCYILIMRGTPLLLQMIVIFYGLPLLGIVFDRFTAGVVAFFLNYAAYFAEIFRGGIQSIDRGQYEASKVLGFDKFTMYKRVIFPQVFKRILAPISNEVITLVKDTSLVYILGLNDILRISQIAMNREASLLPLFEAGAIYLIFVAILTKGFELLEKKYSYYR*