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NECEvent2014_2_3_scaffold_162_31

Organism: NECEvent2014_2_3_Finegoldia_magna_32_10

near complete RP 52 / 55 BSCG 51 / 51 ASCG 15 / 38
Location: comp(27784..29100)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=866779 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 438.0
  • Bit_score: 849
  • Evalue 1.60e-243
Transcription termination factor Rho n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N1T6_FINMA similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 438.0
  • Bit_score: 851
  • Evalue 5.20e-244
  • rbh
transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 99.1
  • Coverage: 438.0
  • Bit_score: 845
  • Evalue 6.10e-243

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Taxonomy

Finegoldia magna → Finegoldia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1317
TTGGAAAAAGACGTATTAGAGTCAAAAAAATTGCAAGATTTGAAAATTATTGCTAAGGCTGTCGGTGTTGCAGGTATTAGCAAATACAACAAGCAAGATTTGATAGAAGAGATTATTAGTCAGGTTAATATTAATGAGAGGAATAATTCTGAAGAAGATTATGATGAATCATCTTCTAACGATGAAAAAGATTTGAAAGATCCATTAAAAGTTGAAGGGATATTGGATTTGCACGAAAATGGATATGGATTTTTGAGATCAGAAGGTTATGATTCAGGAGATGATGATATTTATGTTCCACCTGTTCAAGTTAGAAGATTTAAGCTAAAAACGGGAGATTTTGTAGAAGGATTATCTCGTGAAAAAAAAGATAAAGAAAAATTCAATGCTTTGATTTATGTGAACCGTGTAAATGGAGATACTGTAGAAAATCTAAGAAATAGGCCTGATTTTGAAAATTTGACGCCGATTTATCCAACAGAAAGATTAACGCTAGAAAGAGATTCTAACAATGTATCGATGAGAATTATGGATTTGATAAGCCCTGTTGGAAAGGGACAAAGAGGATTGATTGTTGCCTCACCTAAAACTGGTAAGACGACTTTGCTTAAAAATATTGCAAATTCTATTAGAAAAAATTATCCAGATATTCACGTTATTGTTTTGTTGATTGACGAAAGGCCGGAAGAAGTTACTGATATGAAGCGTTCTGTTTTGGGAGCAGATGTTGTAGCTTCAACTTTTGATGAGATGCCTCAAAATCATATTAGGGTTGCTGAAATCGTGATTGAGAGAGCCAAGAGGCTTGTAGAACATAAAAAAGATGTTGTAATATTGGTCGATTCAATTACTAGATTATCTCGTGCATATAATGTTACTAGCCCTTATTCAGGTAAGACTTTGTCTGGTGGACTTGATCCTCTAGCATTGAATGGCCCTAAAAGATTTTTCGGTGCTGCGAGAAATATAGAAGAAGGCGGTTCTCTGACTATATTGGCGACGGCTTTGATAGAAACAGGATCTAGAATGGATGATGTTATATTCGAAGAATTCAAGGGAACTGGAAATATGGAAATCAAATTGGACAGGAATTTGTCAGAACAAAGAGTTTTCCCTGCAATTGATTTGAATAAATCTGGAACTAGAAAAGATGAATTGCTTCTTACTAAAGAAGAATTATCTGCAATTAATAAAATCAGAAAACAATTGAATTCACAAGAAAATAAAGATATTGCAGATCAAATTATAAAAATGATTAAAAACACAAAAACAAACAAAGAATTTGTAAAATCAATAAATGATTTGCAAAGTTTGTAA
PROTEIN sequence
Length: 439
LEKDVLESKKLQDLKIIAKAVGVAGISKYNKQDLIEEIISQVNINERNNSEEDYDESSSNDEKDLKDPLKVEGILDLHENGYGFLRSEGYDSGDDDIYVPPVQVRRFKLKTGDFVEGLSREKKDKEKFNALIYVNRVNGDTVENLRNRPDFENLTPIYPTERLTLERDSNNVSMRIMDLISPVGKGQRGLIVASPKTGKTTLLKNIANSIRKNYPDIHVIVLLIDERPEEVTDMKRSVLGADVVASTFDEMPQNHIRVAEIVIERAKRLVEHKKDVVILVDSITRLSRAYNVTSPYSGKTLSGGLDPLALNGPKRFFGAARNIEEGGSLTILATALIETGSRMDDVIFEEFKGTGNMEIKLDRNLSEQRVFPAIDLNKSGTRKDELLLTKEELSAINKIRKQLNSQENKDIADQIIKMIKNTKTNKEFVKSINDLQSL*