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NECEvent2014_2_3_scaffold_475_5

Organism: NECEvent2014_2_3_Finegoldia_magna_32_10

near complete RP 52 / 55 BSCG 51 / 51 ASCG 15 / 38
Location: 3899..7405

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=866779 species="Bacteria; Fi similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 999.99
  • Bit_score: 2285
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MZ84_FINMA similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 999.99
  • Bit_score: 2285
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 999.99
  • Bit_score: 2283
  • Evalue 0.0

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Taxonomy

Finegoldia magna → Finegoldia → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3507
ATGAATTTTTTAACTAAAATTTATGAAGATAACACAGAATTTCAAGGATATTTGGATTCTTTATCATCAGATAATTCATCGATTTACATTCACGGGGTGATTAAGGAAGCTTTTGCAAGTTTCGTGTATGCGACATCAAAAAACATCAACAAACCTCTTGTAGTAGTCGTAGAAGATAATATGAGAGCGAGAAATCTGACAGAATATCTGAATGATATTGAAGAAAATATCTGTGAATTTTTCCCGAGCAGAGAACTCAACTTCTACAATGCAAAATCACTAGATGATAATGCAGAAGATCAAAGAGTTAATGTATTGTTCAAATTGTTGAACAACGAAAAATTTATTATTGTTACAACATTTGATGCTTTAACGAAGAAAATCACGAAAAAATCAGTAGCAAAAAAATACGCCTTTACAATAAAAGACACTGATTTGATAAATTTAGAAGAACTTCAAGAAAAATTGAGAGTGTTGAAATACGAAAGAGTAGACACTATTGAATCCAAGGGACAATTTGCTATTAGAGGTGGAATTGTAGATATTTTCCCCGTACACAGCAGATTTCCTGTAAGAATTGAATTATTCGATGATGAAATAGATTCGATGAGATTTTTCGAAGTATCAACTCAAAGATCAATTGAAGATTGCAAATTCGTCGACATCATTAGCTGTAGCGAACTTATTATTGAAGATTCAAAGAAAGAATCCATTATCAATTCTATTCAGAAAAATTTGGACAAAAGAGTCGATCATCCGATTTTTGGAGAAAATGTAGATAATGTCAAGGACAAATTTGAAAAGCTGATGGAATATATCAGAAGCGATTTGGAATATGAAATCGACTTGGTATCGTGTTTTTTAACTAAAAAAGATTATGATACTGTATTCGATTATTTTGCAGATGACAGCATCATGATGATTGAAGATTTGTCTAGATGCTATGATATTTACAAGGAAAAGGAAAAGAGATTTTTGGAAGACTTCGTATATTTGGTTGAAAAAGGAGAAGTTTTATCCAAACACGAACAATCGCTTATTCCGATTTCCGATATTTTGAAATTTATAAAAGCAAAAACATCGGTAAATATTACAAGTTTGGTCAAAAGAACTAGACTTATCGAATCGAATGCGATGTATCAGCTTAAGACATTGGAAGCGCCAAACTTTAATAAAAATATCGACAGTTTGGTTGAAAATATCAAATCCAACAGTTTAAGAGGATTCAAACAAATCGTGTTTGCGGCAAATGTAGAACGCAAAAATATGCTCAAGGATTTGTTCTTAACAAATGGAATTCCAACTCTTGAAGCTGAGGATTACAATGCGAACATTAAATCTTCGCAGGTTTTGATTACTCAGAAGAATTTGCCAAATGGTTTTGAAATAAAAGATCCCAAGTATTTGATAATTACTTACAAGGAAATTTTCGGGCGCGAAAAACAAATTCGAAAACGTAAGAAGAAAAAAAGCACTGGTCAGGACATTGTCAATTATTCAGATTTGAACATTGATGATTATGTGGTTCATGAAAATCACGGGATTGGTCAGTACAAGGGAATCGAAAAAATCGATGTAAATGGAATTCAAAAAGATTACATTGTAATTCAATATAAAGCTAATGATAGGCTGATGATTCCAACCGATCAAATGAATTTAGTCCAAAAATACATCGGGGGAGGCAATGTCAAAAAGCCTTCTTTAAATAAACTAAGCGGAAATGATTGGGCAAAGGCGAAACAAAAAGCCAAGAAATCAGTTGACGAAATGGCGGATGATTTGGTTGAATTGTATTCCAAAAGAGCCAAATTAAAGGGGTATCAGTTCTCACAAGATACCGAATGGCAAAGAGAATTTGAAGATTCCTTCCCTTATGAAGAAACAGATTCACAAGTACGATCCATCGAAGAAATCAAAGCTGATATGGAATCGGATAGGCCAATGGACAGGTTATTGTGTGGCGATGTTGGTTATGGGAAAACAGAAGTTGCTATCAGGGCATGTTTTAAAGCGATAATGGATGGGAAACAAGTTGCGTTTTTAGTTCCGACGACGATTCTTGCGCAGCAGCATTTCAATACAATCAAAGAACGATTCAGAGATTATCCAATTAGAGTTGAAATGATGAGTAGATTCGTTTCTCCTGCACGTCAAAAACAAATTATGAAAGATGTGCAAAGAGGTCTTGTAGATTTATTGGTTGGAACTCATAGGATTTTGTCGAAAAATTTGAAGTTCAAAGACTTAGGATTATTAGTAATCGACGAAGAGCAAAGATTTGGTGTGAGACACAAAGAAAAATTAAAATCTATGAGAGAAAACGTAGATGTGCTAACGCTGTCAGCGACTCCAATTCCTAGAACTTTACAAATGGGATTGACTGGAATAAGAGATATGAGTTTATTAGAAGAACCGCCAGAAGATAGAACTCCTATATCAACTTATGTTACAGAGTACAATCCAAGCTTGATAAGAGATGCAATAATCAGAGAACTTGACCGCGGCGGACAGATTTATTTTGTGTATAATAGAATAGAAGATATTGATCAGATGGAATTCAAATTAAAAGAATTAGTTCCGGAATTAAACATAGCGATAGCACATGGTAGAATGAACGAAAAAGAGCTAGAAAACGTAATGCTCGACTTTCAAGATGGAATTTACGATTTGCTATTGTGCACAACTATTATAGAAACAGGTCTTGATATACAAAATGTCAACACAATGATAATTTATAATGCAGATAAGATGGGCTTGTCGCAATTGTATCAATTAAAGGGACGTATTGGTCGATCTGATAGAACTTCGTTTGCTTATTTTACATACGAAGGACAAAAATCATTAACAGAAATTTCCGAAAAAAGACTTATGGCTATAAAAGATTTTACGGAATTTGGTTCTGGGTTTAAAATAGCAATGAGAGATTTGGAACTTAGAGGAGCTGGAAATCTTTTGGGAGAAAGCCAACACGGTCACATCGCAAAAATCGGTTATGATTTGTATGTGAAGCTTTTGGAACAAGCTGTCAGAGAAGCTAAGGGTGAGACTATTTCTGAAAATAAAAATACTGTTATAATAGAAATCAAAGTCAACGGATACATTCCAGAAGATTACATTTCTGAGAATGAAACAAAGATTGATATCTACAAAAAAATCGCATCTATTCAAGATGAAGATGATTATTCTGAAATAATTGATGAATTAATCGACAGGTTTGGTGATGTTCCTAAGCCTATCGTTAATATAATGGATGTATCTATAATAAAAGCGTTCTGCGCGAGATTATCCATTGAAAGTATAAAAGAAATAAAGGGAGAACTTTTCTTGCAATTTTCTTCTCCTGACAAAATTTCATTAGAAAAATTAAAATACTTGACAGAAAATTACAAAAAAGAAATGAGATTTGATTTGTCAGAAAAACCAAAAATCATTTTGGGATTTGAAGACAAAAATTTGAGAGATCCTATCGAAGTATTATCAATACTTTTGAAGGACAATGAGAAATAA
PROTEIN sequence
Length: 1169
MNFLTKIYEDNTEFQGYLDSLSSDNSSIYIHGVIKEAFASFVYATSKNINKPLVVVVEDNMRARNLTEYLNDIEENICEFFPSRELNFYNAKSLDDNAEDQRVNVLFKLLNNEKFIIVTTFDALTKKITKKSVAKKYAFTIKDTDLINLEELQEKLRVLKYERVDTIESKGQFAIRGGIVDIFPVHSRFPVRIELFDDEIDSMRFFEVSTQRSIEDCKFVDIISCSELIIEDSKKESIINSIQKNLDKRVDHPIFGENVDNVKDKFEKLMEYIRSDLEYEIDLVSCFLTKKDYDTVFDYFADDSIMMIEDLSRCYDIYKEKEKRFLEDFVYLVEKGEVLSKHEQSLIPISDILKFIKAKTSVNITSLVKRTRLIESNAMYQLKTLEAPNFNKNIDSLVENIKSNSLRGFKQIVFAANVERKNMLKDLFLTNGIPTLEAEDYNANIKSSQVLITQKNLPNGFEIKDPKYLIITYKEIFGREKQIRKRKKKKSTGQDIVNYSDLNIDDYVVHENHGIGQYKGIEKIDVNGIQKDYIVIQYKANDRLMIPTDQMNLVQKYIGGGNVKKPSLNKLSGNDWAKAKQKAKKSVDEMADDLVELYSKRAKLKGYQFSQDTEWQREFEDSFPYEETDSQVRSIEEIKADMESDRPMDRLLCGDVGYGKTEVAIRACFKAIMDGKQVAFLVPTTILAQQHFNTIKERFRDYPIRVEMMSRFVSPARQKQIMKDVQRGLVDLLVGTHRILSKNLKFKDLGLLVIDEEQRFGVRHKEKLKSMRENVDVLTLSATPIPRTLQMGLTGIRDMSLLEEPPEDRTPISTYVTEYNPSLIRDAIIRELDRGGQIYFVYNRIEDIDQMEFKLKELVPELNIAIAHGRMNEKELENVMLDFQDGIYDLLLCTTIIETGLDIQNVNTMIIYNADKMGLSQLYQLKGRIGRSDRTSFAYFTYEGQKSLTEISEKRLMAIKDFTEFGSGFKIAMRDLELRGAGNLLGESQHGHIAKIGYDLYVKLLEQAVREAKGETISENKNTVIIEIKVNGYIPEDYISENETKIDIYKKIASIQDEDDYSEIIDELIDRFGDVPKPIVNIMDVSIIKAFCARLSIESIKEIKGELFLQFSSPDKISLEKLKYLTENYKKEMRFDLSEKPKIILGFEDKNLRDPIEVLSILLKDNEK*