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NECEvent2014_2_3_Actinomycetales_HPA0247-rel_57_22_partial

NECEvent2014_2_3_Actinomyces_neuii_57_37
In projects: NECEvent2014_2_3

Consensus taxonomy: Actinomyces neuii  →  Actinomyces  →  Actinomycetales  →  Actinobacteria  →  Actinobacteria  →  Bacteria

Displaying items 1-50 of 580 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_2_3_scaffold_279 172_003_scaffold_279
Genus: Actinomyces (87.5%)
16 17770 bp 62.41 30.15 88.78
NECEvent2014_2_3_scaffold_299 172_003_scaffold_299
Species: Atopobium sp. ICM58 (50%)
12 16601 bp 58.32 37.71 78.88
NECEvent2014_2_3_scaffold_559 172_003_scaffold_559
Species: Actinomyces sp. HPA0247 (72.73%)
11 7771 bp 55.51 642.64 72.81
NECEvent2014_2_3_scaffold_451 172_003_scaffold_451
Species: Actinomyces sp. HPA0247 (55.56%)
9 9014 bp 61.97 637.72 89.93
NECEvent2014_2_3_scaffold_593 172_003_scaffold_593
Genus: Actinomyces (100%)
7 5612 bp 61.55 34.53 89.70
NECEvent2014_2_3_scaffold_580 172_003_scaffold_580
Species: Actinomyces sp. HPA0247 (50%)
6 5791 bp 54.53 596.92 86.67
NECEvent2014_2_3_scaffold_1639 172_003_scaffold_1639
Genus: Actinomyces (50%)
6 3346 bp 55.98 1372.06 29.32
NECEvent2014_2_3_scaffold_885 172_003_scaffold_885
Genus: Actinomyces (83.33%)
6 3234 bp 61.13 32.33 83.49
NECEvent2014_2_3_scaffold_1148 172_003_scaffold_1148
Species: Actinomyces neuii (66.67%)
6 2403 bp 54.02 4.37 82.06
NECEvent2014_2_3_scaffold_1018 172_003_scaffold_1018
Species: Actinomyces neuii (100%)
6 2673 bp 54.10 4.88 79.35
NECEvent2014_2_3_scaffold_2945 172_003_scaffold_2945
Species: Actinomyces neuii (80%)
5 1111 bp 57.07 3.78 98.02
NECEvent2014_2_3_scaffold_1074 172_003_scaffold_1074
Species: Actinomyces neuii (100%)
5 2554 bp 56.23 3.52 92.44
NECEvent2014_2_3_scaffold_1076 172_003_scaffold_1076
Class: Actinobacteria (80%)
5 2547 bp 57.24 645.70 57.01
NECEvent2014_2_3_scaffold_582 172_003_scaffold_582
Species: Actinomyces sp. HPA0247 (60%)
5 5746 bp 58.27 55.21 93.09
NECEvent2014_2_3_scaffold_855 172_003_scaffold_855
Species: Actinomyces neuii (80%)
5 3431 bp 55.38 4.28 100.38
NECEvent2014_2_3_scaffold_1955 172_003_scaffold_1955 5 1512 bp 51.19 4.27 89.42
NECEvent2014_2_3_scaffold_2147 172_003_scaffold_2147
Species: Actinomyces neuii (100%)
4 1403 bp 60.23 3.42 97.08
NECEvent2014_2_3_scaffold_1027 172_003_scaffold_1027
Species: Actinomyces neuii (100%)
4 2651 bp 56.02 3.17 87.25
NECEvent2014_2_3_scaffold_1030 172_003_scaffold_1030
Species: Actinomyces neuii (100%)
4 2649 bp 56.40 4.08 97.74
NECEvent2014_2_3_scaffold_1543 172_003_scaffold_1543
Species: Actinomyces neuii (100%)
4 1850 bp 56.59 4.05 86.27
NECEvent2014_2_3_scaffold_1034 172_003_scaffold_1034
Species: Actinomyces neuii (100%)
4 2643 bp 58.42 4.09 97.39
NECEvent2014_2_3_scaffold_2155 172_003_scaffold_2155
Species: Actinomyces neuii (100%)
4 1398 bp 57.87 3.22 99.14
NECEvent2014_2_3_scaffold_2156 172_003_scaffold_2156
Species: Actinomyces neuii (100%)
4 1398 bp 56.80 3.86 93.35
NECEvent2014_2_3_scaffold_788 172_003_scaffold_788
Species: Actinomyces neuii (100%)
4 3821 bp 58.54 4.32 95.32
NECEvent2014_2_3_scaffold_1570 172_003_scaffold_1570
Species: Actinomyces neuii (50%)
4 1828 bp 59.46 6.73 102.74
NECEvent2014_2_3_scaffold_809 172_003_scaffold_809
Species: Actinomyces neuii (100%)
4 3687 bp 57.36 4.48 88.53
NECEvent2014_2_3_scaffold_1322 172_003_scaffold_1322
Species: Actinomyces neuii (100%)
4 2137 bp 54.94 4.07 97.43
NECEvent2014_2_3_scaffold_2716 172_003_scaffold_2716
Species: Actinomyces neuii (100%)
4 1179 bp 55.89 4.33 80.15
NECEvent2014_2_3_scaffold_835 172_003_scaffold_835
Species: Actinomyces neuii (100%)
4 3530 bp 57.76 3.91 95.95
NECEvent2014_2_3_scaffold_1095 172_003_scaffold_1095
Species: Actinomyces neuii (100%)
4 2508 bp 52.95 5.14 91.15
NECEvent2014_2_3_scaffold_1607 172_003_scaffold_1607
Species: Actinomyces neuii (100%)
4 1791 bp 61.75 3.85 90.28
NECEvent2014_2_3_scaffold_1353 172_003_scaffold_1353
Species: Actinomyces neuii (100%)
4 2102 bp 54.19 3.57 97.76
NECEvent2014_2_3_scaffold_1356 172_003_scaffold_1356
Species: Actinomyces neuii (100%)
4 2094 bp 61.17 5.16 94.99
NECEvent2014_2_3_scaffold_1868 172_003_scaffold_1868
Species: Actinomyces neuii (100%)
4 1570 bp 58.41 3.82 91.91
NECEvent2014_2_3_scaffold_1357 172_003_scaffold_1357
Species: Actinomyces neuii (100%)
4 2092 bp 50.53 4.09 87.19
NECEvent2014_2_3_scaffold_1614 172_003_scaffold_1614
Species: Actinomyces neuii (100%)
4 1785 bp 54.01 4.20 93.45
NECEvent2014_2_3_scaffold_2479 172_003_scaffold_2479
Species: Actinomyces neuii (100%)
4 1257 bp 60.86 3.58 91.65
NECEvent2014_2_3_scaffold_1619 172_003_scaffold_1619
Species: Actinomyces neuii (100%)
4 1782 bp 56.73 2.86 98.48
NECEvent2014_2_3_scaffold_2489 172_003_scaffold_2489
Species: Actinomyces neuii (75%)
4 1253 bp 52.83 4.19 86.99
NECEvent2014_2_3_scaffold_1382 172_003_scaffold_1382
Species: Actinomyces neuii (100%)
4 2057 bp 53.28 4.01 87.36
NECEvent2014_2_3_scaffold_1895 172_003_scaffold_1895
Species: Actinomyces neuii (75%)
4 1545 bp 58.64 4.47 91.46
NECEvent2014_2_3_scaffold_872 172_003_scaffold_872
Species: Actinomyces neuii (100%)
4 3301 bp 53.04 3.91 100.15
NECEvent2014_2_3_scaffold_1392 172_003_scaffold_1392
Species: Actinomyces neuii (100%)
4 2040 bp 58.82 3.68 95.29
NECEvent2014_2_3_scaffold_1143 172_003_scaffold_1143
Species: Actinomyces neuii (100%)
4 2419 bp 53.58 3.60 93.39
NECEvent2014_2_3_scaffold_1405 172_003_scaffold_1405
Species: Actinomyces neuii (100%)
4 2028 bp 55.42 3.92 97.63
NECEvent2014_2_3_scaffold_1410 172_003_scaffold_1410
Species: Actinomyces neuii (100%)
4 2019 bp 58.05 4.01 99.55
NECEvent2014_2_3_scaffold_908 172_003_scaffold_908
Species: Actinomyces neuii (100%)
4 3148 bp 60.23 3.67 96.25
NECEvent2014_2_3_scaffold_1433 172_003_scaffold_1433
Species: Actinomyces neuii (100%)
4 1998 bp 53.20 3.83 87.54
NECEvent2014_2_3_scaffold_1181 172_003_scaffold_1181
Species: Actinomyces neuii (100%)
4 2345 bp 56.03 4.61 86.48
NECEvent2014_2_3_scaffold_1182 172_003_scaffold_1182
Species: Actinomyces neuii (100%)
4 2344 bp 51.92 3.84 101.24
Displaying items 1-50 of 580 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.