ggKbase home page

NECEvent2014_2_3_scaffold_613_1

Organism: NECEvent2014_2_3_Streptococcus_salivarius-rel_40_5_partial

partial RP 14 / 55 BSCG 12 / 51 MC: 1 ASCG 6 / 38 MC: 1
Location: 3..1385

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=936576 species="Bacteria; Fi similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 460.0
  • Bit_score: 893
  • Evalue 1.70e-256
Transcription-repair-coupling factor n=1 Tax=Streptococcus salivarius (strain JIM8777) RepID=F8LM33_STRE8 similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 460.0
  • Bit_score: 889
  • Evalue 1.40e-255
trcF; transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 460.0
  • Bit_score: 889
  • Evalue 3.90e-256

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Streptococcus sp. ACS2 → Streptococcus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1383
ATTGAAAATCTAGCTAAAGGGCGTATTGATATTATTATTGGTACTCACCGCCTACTGTCTAAAGATGTTAAGTTTTCTGACTTAGGCTTGCTAGTAATTGATGAAGAACAACGTTTTGGCGTGAAGCATAAAGAGAAACTTAAGGAGTTGAAAGCTAAAGTTGATGTCCTTACTCTAACTGCGACACCTATTCCTCGTACGCTTCATATGTCTATGTTAGGTATTCGTGATTTGTCGATTATTGAGACAGCACCTACCAACCGTTATCCAGTTCAAACTTATGTTATGGAAACCAATCCTGGTCTTATTCGAGAAGCGATATTAAGAGAGATGGACCGAGGTGGTCAGATTTTTTATGTTTATAATCGTGTTGAAACCATTGATCAAAAAGTTTCTGAATTACATGAGCTAGTCCCTGAAGCACGTATCGGATTTGTTCATGGTCAGATGAGTGAGGTTATGTTGGAGAATACCCTCTTGGATTTCTTGAATGGTGATTACGATGTATTGGTAGCAACGACCATTATCGAGACAGGGATTGATATCTCCAACGTTAATACTCTCTTCATTGAGAATGCAGATCATATGGGCTTATCTACCCTTTATCAGTTGAGAGGTCGTGTGGGACGTAGTAATCGAATTGCTTACGCCTATCTCATGTATCGTCCTGACAAAGTGTTGACGGAAGTCTCTGAGAAGCGATTGGATGCTATTAAGGGCTTTACAGAACTGGGATCAGGTTTCAAAATTGCCATGCGTGATTTATCAATTCGTGGTGCAGGGAACATTCTTGGTGCTTCTCAAAGTGGTTTCATCGACTCAGTCGGGTTTGAGATGTACTCGCAACTCTTGGAAGAGGCTATCAATAAACGTCAAGGTAAAACTCAAGTTCGACGTAAAGGAAATGCAGAGTTCAATCTTCAGATTGATGCTTACCTCCCTTCTGACTATATTTCTGACGAGCGCCAAAAAATTGAAATTTATAAGCGTATTCGAGAAATTGAGAATCAGAAAGATTATCAAGACCTTCAAGATGAGCTTATTGACCGCTTTGGAGAATATCCAGACCAAGTTGCCTATCTCATTGAGATTGGTCTGGTTAAGGCCTATTTGGATGCTGCCTTTGCAGAATTAGTTGAGCGTAAGAACGATACTATCACTGTTCGTTTCGAAAAAGCCTCTCTCAAATTCTTCTTGACTCAAGATTATTTCGAAGCCATCTCTAAAACGCATTTAAAAGCAAAAATCAGTGATAACCAGGGGAAAGTAGAGATTACTTTTGATGTTCGTAACAAGAAAGACTATGAAATTCTTGAAGAATTAAAGATTTTTGGTCAGAAATTTATGGAAATCAAAGAACGTAAAGAAAAAAAAGAAGCTTAA
PROTEIN sequence
Length: 461
IENLAKGRIDIIIGTHRLLSKDVKFSDLGLLVIDEEQRFGVKHKEKLKELKAKVDVLTLTATPIPRTLHMSMLGIRDLSIIETAPTNRYPVQTYVMETNPGLIREAILREMDRGGQIFYVYNRVETIDQKVSELHELVPEARIGFVHGQMSEVMLENTLLDFLNGDYDVLVATTIIETGIDISNVNTLFIENADHMGLSTLYQLRGRVGRSNRIAYAYLMYRPDKVLTEVSEKRLDAIKGFTELGSGFKIAMRDLSIRGAGNILGASQSGFIDSVGFEMYSQLLEEAINKRQGKTQVRRKGNAEFNLQIDAYLPSDYISDERQKIEIYKRIREIENQKDYQDLQDELIDRFGEYPDQVAYLIEIGLVKAYLDAAFAELVERKNDTITVRFEKASLKFFLTQDYFEAISKTHLKAKISDNQGKVEITFDVRNKKDYEILEELKIFGQKFMEIKERKEKKEA*