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NECEvent2014_2_7_scaffold_137_2

Organism: NECEvent2014_2_7_Veillonella_parvula-rel_39_10

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38 MC: 6
Location: 439..1380

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 313.0
  • Bit_score: 621
  • Evalue 5.10e-175
tRNA pseudouridine synthase B n=3 Tax=Veillonella RepID=D1YM87_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 313.0
  • Bit_score: 621
  • Evalue 3.70e-175
  • rbh
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 89.5
  • Coverage: 313.0
  • Bit_score: 570
  • Evalue 2.70e-160

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Taxonomy

Veillonella sp. 3_1_44 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 942
ATGGATGGGATATTACCATTTTTAAAACCACCTGGCATTACAAGCCATGATGCCGTTGCTATTTGTCGTCGTATTCTAAAGGAAAAGCGCATTGGTCATAGCGGTACATTGGATCCTATGGCTTATGGTGTATTGCCTGTGTTTCTTGGTAAGGCTACGCGCCTTATAGAATACACGGATGAATTTGATAAAACCTATGTAGCAGAATGTAAATTGGGTACTTTTACAGATACTGAAGATAGCTCAGGACAACCTGTATTGCCAGATAATGATATGCTATTGCGAGATGGTATTGTATTGAATCGAGCTATTCAATCTACAGAAATCTCGACAACGATGGTTAAACCAGGCTTTGAAGAATTGGTTAGTATTTTGAGAAAATTTGCTGGCGTTCAGGACCAAAGGCCGTCTAAGTATTCTGCCATTAAAGTAAATGGTATTCGAGCTTATGAATATGCTCGTAAAGGTATTCCTGTGGAGCTACCATTACGTCAAATTCATATTAAAAATATTGAGCTCATTGCTTATGGATTCCCTTTTTTCACGATTCGCGTGACATGCTCAGGGGGGACTTATATTCGCTCATTATTACGCGATATTTGTATTGCTTTAGGTATTCCTGGCGCTATGACTTCTTTGGCACGTACTCAAGTAGGCCCTTTTGATATCGGCTCTGCTAAGATGGCCGAAGAATTGATGCTACATGGTGAAAGTCTGTTGTTGCCAACAGATACGGCTGTTTCTCATCTTTCAAAAGTAACTGTAAATAGTGTACAATTAAGAATGATGATAGAAGGCAAGCAGTTACCGATTGGTAAAGAATTTGCTTTCACAGAAATTGGTCAGCTCTATAGAGCTTATGGACCGAATGGTTTTATTGGTATTATGAAACGAAACAACCACACATTAAAAGTGGAAAAAAATATTTTTGTTGAAGGATAA
PROTEIN sequence
Length: 314
MDGILPFLKPPGITSHDAVAICRRILKEKRIGHSGTLDPMAYGVLPVFLGKATRLIEYTDEFDKTYVAECKLGTFTDTEDSSGQPVLPDNDMLLRDGIVLNRAIQSTEISTTMVKPGFEELVSILRKFAGVQDQRPSKYSAIKVNGIRAYEYARKGIPVELPLRQIHIKNIELIAYGFPFFTIRVTCSGGTYIRSLLRDICIALGIPGAMTSLARTQVGPFDIGSAKMAEELMLHGESLLLPTDTAVSHLSKVTVNSVQLRMMIEGKQLPIGKEFAFTEIGQLYRAYGPNGFIGIMKRNNHTLKVEKNIFVEG*