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NECEvent2014_2_7_scaffold_145_2

Organism: NECEvent2014_2_7_Veillonella_parvula-rel_39_10

near complete RP 48 / 55 MC: 1 BSCG 47 / 51 ASCG 13 / 38 MC: 6
Location: 1488..2420

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BQ44_VEIPT similarity UNIREF
DB: UNIREF100
  • Identity: 97.6
  • Coverage: 288.0
  • Bit_score: 569
  • Evalue 1.60e-159
  • rbh
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 97.6
  • Coverage: 288.0
  • Bit_score: 569
  • Evalue 4.60e-160
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACZ25501.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veill similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 288.0
  • Bit_score: 569
  • Evalue 2.30e-159

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Taxonomy

Veillonella parvula → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 933
TTGTCAAAAAACTCTTTCCGCGGTATTGTGTACATAAGCGCTATGCCATGGCAGGAAAGGGGATTTATGTTATACACAAACGAAGAACCTTTAGTACAAAGAACATGTATTAAAACTGCAAACTTACAACATGACAACTATCAGTCAGAAAAATTAGAAACACAGGCATTACCATCTCATTCTTTATTATCGAAAGCTGATGAGTCTAGCCAAAGTATTCCAGAGAAATTGAAATTACAGACCCTCGTCTGTGGTCATCAAGTTTTATCGTCCTTGTCGGACAAGAGTCTCGTGTCCATTTGTCAAAAGCCAAATATGAGGATTCAGACGGTAGGGTATCAACCGTGGTCCGTTGATGAGCTTCGTCATGATGCGGCACAAATCGAGCTCTGTCGCAGGTATCGACCGCTCATCTTGCACTATACGAATCGCATGGGAAACCGTGAGTTCCGCGAGGACGTAGAGAGCTATCTTTGGGCGATCCTCATAGAATCGATTTATAGCTTTGATTTGGAAGGGCCCGTACCGTTTCCAGGCTTTGTGAAAGCTGGCGTCATGTACGGTTACATGCGGTACTGGAAGCGTGAACGATTGCGATATCGCCGTGAAATTCACATCCCAGATCGGACCACCGATGATGGAGAAGTCGCCTTTGGTATGGATATCTTCGCATCTGGCGAGAATGTAGCGGATATGGTGATGAGTGCCGATGAAGAGCATAGGCTTCGAGCACGCCTCGTATGGGCCTTAGGCAGACTATCTCCTGATCAACGAGACCTACTGCGCCGTGTCTACGGTGAGTGCCAAAGCTTGGTATCGGTTAGTGAAGAGCTGACCTGCAGCCGCCAAGCCATCCAACGGCGTCACGAACGAGCTATTCGGAAGCTGCGTAGGTATTTGAGTACGGACTTTAAGGACGTGCGTGTACATTAG
PROTEIN sequence
Length: 311
LSKNSFRGIVYISAMPWQERGFMLYTNEEPLVQRTCIKTANLQHDNYQSEKLETQALPSHSLLSKADESSQSIPEKLKLQTLVCGHQVLSSLSDKSLVSICQKPNMRIQTVGYQPWSVDELRHDAAQIELCRRYRPLILHYTNRMGNREFREDVESYLWAILIESIYSFDLEGPVPFPGFVKAGVMYGYMRYWKRERLRYRREIHIPDRTTDDGEVAFGMDIFASGENVADMVMSADEEHRLRARLVWALGRLSPDQRDLLRRVYGECQSLVSVSEELTCSRQAIQRRHERAIRKLRRYLSTDFKDVRVH*